RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 C1GALT1Q9NS00 363 aa5.32□□□□□ -1.56
RTN4-213ENST00000485749 PCDHB10Q9UN67 800 aa5.32□□□□□ -1.56
RTN4-213ENST00000485749 IPO5O00410 1097 aaKnown RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 DNAJA2O60884 412 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 EFCAB14O75071 495 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 VAMP4O75379 141 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 PGRP06401 933 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 TGFB3P10600 412 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 RAG1P15918 1043 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 FUT4P22083 530 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 PIK3CAP42336 1068 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 NUCB1Q02818 461 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 PRKCQQ04759 706 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 RING1Q06587 406 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 TRIM29Q14134 588 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 MORC3Q14149 939 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 IFI16Q16666 785 aaKnown RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 KIF4BQ2VIQ3 1234 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 RGL3Q3MIN7 710 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 PDXDC1Q6P996 788 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 MYO1HQ8N1T3 1032 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 ANKRD42Q8N9B4 389 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 ACRBPQ8NEB7 543 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 BHLHE22Q8NFJ8 381 aaPredicted RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 WDR66Q8TBY9 1149 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 PI4K2BQ8TCG2 481 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 FBXO41Q8TF61 875 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 FRS2Q8WU20 508 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 FAM168AQ92567 244 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 SKA1Q96BD8 255 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 PAWRQ96IZ0 340 aaKnown RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 HRASLS5Q96KN8 279 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 ZNF830Q96NB3 372 aaPredicted RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 FAM210AQ96ND0 272 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 SCLT1Q96NL6 688 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 WDR18Q9BV38 432 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 ZC3H12CQ9C0D7 883 aaKnown RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 PUS7LQ9H0K6 701 aaKnown RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 TSPY26PQ9H489 355 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 SLC5A4Q9NY91 659 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 FAM53CQ9NYF3 392 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 SUCOQ9UBS9 1254 aaKnown RBP5.31□□□□□ -1.56
RTN4-213ENST00000485749 SLC45A1Q9Y2W3 748 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 IKBKGQ9Y6K9 419 aa5.31□□□□□ -1.56
RTN4-213ENST00000485749 TMEM265A0A087WTH1 108 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 TRIM64CA6NLI5 447 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 CHURC1-FNTBB4DL54 471 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 RGS13O14921 159 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 IPO8O15397 1037 aaKnown RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 TCEA3O75764 348 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 ECEL1O95672 775 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 NBPF7P0C2Y1 421 aaPredicted RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 SDSP20132 328 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 YARSP54577 528 aaKnown RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 PPP2R2AP63151 447 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 PUM3Q15397 648 aaKnown RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 ANKRD39Q53RE8 183 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 ZC3H12AQ5D1E8 599 aaKnown RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 SPECC1Q5M775 1068 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 CCDC158Q5M9N0 1113 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 HYIQ5T013 277 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 NXNQ6DKJ4 435 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 CNNM4Q6P4Q7 775 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 C14orf80Q86SX3 495 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 PASD1Q8IV76 773 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 MCATQ8IVS2 390 aaKnown RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 WNT10AQ9GZT5 417 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 CCDC86Q9H6F5 360 aaKnown RBP5.3□□□□□ -1.56
RTN4-213ENST00000485749 PTPRHQ9HD43 1115 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 SUSD2Q9UGT4 822 aa5.3□□□□□ -1.56
RTN4-213ENST00000485749 SHTN1A0MZ66 631 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 FANCGO15287 622 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 GPR39O43194 453 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 AKAP10O43572 662 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 KIF5CO60282 957 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 ZEB2O60315 1214 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 DNAJC8O75937 253 aaPredicted RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 IGHDP01880 384 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 ASLP04424 464 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 CTSBP07858 339 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 FAM87AP0C7U9 286 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 PABPC1P11940 636 aaKnown RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 RAB27AP51159 221 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 GABREP78334 506 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 ID3Q02535 119 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 ZNF648Q5T619 568 aaPredicted RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 ANGEL2Q5VTE6 544 aaKnown RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 ARMC3Q5W041 872 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 SLC6A19Q695T7 634 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 IQCEQ6IPM2 695 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 NSMFQ6X4W1 530 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 DAAM2Q86T65 1068 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 ANKLE2Q86XL3 938 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 TCEAL8Q8IYN2 117 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 SMYD4Q8IYR2 804 aaPredicted RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 ENAHQ8N8S7 591 aaPredicted RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 CHMP4CQ96CF2 233 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms