RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 SOCS4Q8WXH5 440 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 FGD4Q96M96 766 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 GDPD2Q9HCC8 539 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 RCOR1Q9UKL0 485 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 ELP1O95163 1332 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 SPTLC2O15270 562 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 SLC37A4O43826 429 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 MYCLP12524 364 aaPredicted RBP20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 PTGDRQ13258 359 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 KIF22Q14807 665 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 ZNF792Q3KQV3 632 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 MORN1Q5T089 497 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 TMEM87AQ8NBN3 555 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 BEGAINQ9BUH8 593 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 SLC5A4Q9NY91 659 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 DOCK5Q9H7D0 1870 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 FAM86B1E9PN63 330 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 LAD1O00515 517 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 COBLO75128 1261 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 STAM2O75886 525 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 FAM86B2P0C5J1 330 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 EDNRBP24530 442 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 SETQ01105 290 aaPredicted RBP20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 MAP2K5Q13163 448 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 Q4G0T1 1027 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 CEP55Q53EZ4 464 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 NIPA1Q7RTP0 329 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 DPP9Q86TI2 863 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 VSIG10LQ86VR7 867 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 NUDT12Q9BQG2 462 aa20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 DIS3Q9Y2L1 958 aaKnown RBP20.11■□□□□ 0.81
SMARCD3-212ENST00000485610 IGLV3-22A0A075B6J6 115 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 GPR25O00155 361 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 OR52Z1P0C646 297 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 PSMC4P43686 418 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 CALCRLQ16602 461 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 PRR16Q569H4 304 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 ZNF467Q7Z7K2 595 aaPredicted RBP20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 LENG9Q96B70 501 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 MXRA8Q9BRK3 442 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 UBIAD1Q9Y5Z9 338 aa20.1■□□□□ 0.81
SMARCD3-212ENST00000485610 ASB14A6NK59 587 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 PPP6R2O75170 966 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 CTGFP29279 349 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 RGS2P41220 211 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 PDE4DQ08499 809 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 STXBP2Q15833 593 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 ARL6IP4Q66PJ3 421 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 PLA2G4DQ86XP0 818 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 C4orf32Q8N8J7 132 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 TRIM47Q96LD4 638 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 ARHGAP39Q9C0H5 1083 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 TMEM60Q9H2L4 133 aa20.09■□□□□ 0.81
SMARCD3-212ENST00000485610 MEIS1O00470 390 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 HOXC6P09630 235 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 ITGB5P18084 799 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 MCM4P33991 863 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 PRPHP41219 470 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 DNAJC5GQ8N7S2 189 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 CYP2W1Q8TAV3 490 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 USP6NLQ92738 828 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 APBA2Q99767 749 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 JADE2Q9NQC1 790 aa20.08■□□□□ 0.81
SMARCD3-212ENST00000485610 WDR81Q562E7 1941 aa20.08■□□□□ 0.8
SMARCD3-212ENST00000485610 DDX11L8A8MPP1 907 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 TBX3O15119 743 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 EIF3JO75822 258 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 ME1P48163 572 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 NLRX1Q86UT6 975 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 FERMT2Q96AC1 680 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 GPRASP2Q96D09 838 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 ERO1AQ96HE7 468 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 MAML3Q96JK9 1138 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 ZFP91Q96JP5 570 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 INPP4AQ96PE3 977 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 KCNMB3Q9NPA1 279 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 GJD2Q9UKL4 321 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 MRVI1Q9Y6F6 885 aa20.07■□□□□ 0.8
SMARCD3-212ENST00000485610 FKTNO75072 461 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 MTMR1Q13613 665 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 GNPTABQ3T906 1256 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 ARMCX2Q7L311 632 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 SLFN12Q8IYM2 578 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 MSL3Q8N5Y2 521 aaKnown RBP20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 NPLOC4Q8TAT6 608 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 ETNPPLQ8TBG4 499 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 MTMR9Q96QG7 549 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 WBP1LQ9NX94 342 aa20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 FBXO2Q9UK22 296 aaPredicted RBP20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 DDX49Q9Y6V7 483 aaKnown RBP20.06■□□□□ 0.8
SMARCD3-212ENST00000485610 SYNGAP1Q96PV0 1343 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 MSH4O15457 936 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 MARCH6O60337 910 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms