RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 FOXD4L1Q9NU39 408 aa22.75■■□□□ 1.23
COL6A2-208ENST00000485591 CCL5P13501 91 aa22.74■■□□□ 1.23
COL6A2-208ENST00000485591 MRPS9P82933 396 aaKnown RBP22.74■■□□□ 1.23
COL6A2-208ENST00000485591 TAPT1Q6NXT6 567 aa22.74■■□□□ 1.23
COL6A2-208ENST00000485591 TNFRSF25Q93038 417 aa22.74■■□□□ 1.23
COL6A2-208ENST00000485591 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.74■■□□□ 1.23
COL6A2-208ENST00000485591 RBM47A0AV96 593 aaKnown RBP22.73■■□□□ 1.23
COL6A2-208ENST00000485591 BTBD18B2RXH4 712 aa22.73■■□□□ 1.23
COL6A2-208ENST00000485591 SEPT4O43236 478 aa22.73■■□□□ 1.23
COL6A2-208ENST00000485591 PDCP20941 246 aa22.73■■□□□ 1.23
COL6A2-208ENST00000485591 ARHGAP4P98171 946 aa22.73■■□□□ 1.23
COL6A2-208ENST00000485591 NR5A1Q13285 461 aa22.73■■□□□ 1.23
COL6A2-208ENST00000485591 LARP1BQ659C4 914 aaKnown RBP22.73■■□□□ 1.23
COL6A2-208ENST00000485591 PAK6Q9NQU5 681 aaPredicted RBP22.73■■□□□ 1.23
COL6A2-208ENST00000485591 CCDC194A0A1B0GVG4 234 aa22.72■■□□□ 1.23
COL6A2-208ENST00000485591 CYP3A4P08684 503 aa22.72■■□□□ 1.23
COL6A2-208ENST00000485591 AKR1A1P14550 325 aa22.72■■□□□ 1.23
COL6A2-208ENST00000485591 CNGA1P29973 690 aa22.72■■□□□ 1.23
COL6A2-208ENST00000485591 NONOQ15233 471 aaKnown RBP eCLIP22.72■■□□□ 1.23
COL6A2-208ENST00000485591 CCDC144BQ3MJ40 725 aa22.72■■□□□ 1.23
COL6A2-208ENST00000485591 INPP4AQ96PE3 977 aaPredicted RBP22.72■■□□□ 1.23
COL6A2-208ENST00000485591 FAM184BQ9ULE4 1060 aa22.72■■□□□ 1.23
COL6A2-208ENST00000485591 H3BQV1 296 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 MSCO60682 206 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 RGS20O76081 388 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 MYCP01106 439 aaPredicted RBP22.71■■□□□ 1.23
COL6A2-208ENST00000485591 GNPTABQ3T906 1256 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 IFFO2Q5TF58 517 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 TNS4Q8IZW8 715 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 TBCKQ8TEA7 893 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 SCFD2Q8WU76 684 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 RNF208Q9H0X6 261 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 FOXP1Q9H334 677 aaPredicted RBP22.71■■□□□ 1.23
COL6A2-208ENST00000485591 PDGFCQ9NRA1 345 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 DDX20Q9UHI6 824 aaKnown RBP22.71■■□□□ 1.23
COL6A2-208ENST00000485591 UBIAD1Q9Y5Z9 338 aa22.71■■□□□ 1.23
COL6A2-208ENST00000485591 ADCYAP1R1P41586 468 aa22.7■■□□□ 1.22
COL6A2-208ENST00000485591 IQSEC1Q6DN90 963 aa22.7■■□□□ 1.22
COL6A2-208ENST00000485591 SEPT14Q6ZU15 432 aa22.7■■□□□ 1.22
COL6A2-208ENST00000485591 PIK3AP1Q6ZUJ8 805 aa22.7■■□□□ 1.22
COL6A2-208ENST00000485591 ABHD8Q96I13 439 aa22.7■■□□□ 1.22
COL6A2-208ENST00000485591 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
COL6A2-208ENST00000485591 ICAM3P32942 547 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 USP11P51784 963 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 TTLL4Q14679 1199 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 INF2Q27J81 1249 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 EARS2Q5JPH6 523 aaKnown RBP22.69■■□□□ 1.22
COL6A2-208ENST00000485591 NLRX1Q86UT6 975 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 GPRASP2Q96D09 838 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 RTEL1Q9NZ71 1219 aa22.69■■□□□ 1.22
COL6A2-208ENST00000485591 DOCK5Q9H7D0 1870 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.68■■□□□ 1.22
COL6A2-208ENST00000485591 ADCY6O43306 1168 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 FIBPO43427 364 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 EDIL3O43854 480 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 GJB1P08034 283 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 ITGB5P18084 799 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 SYT1P21579 422 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 U2AF2P26368 475 aaKnown RBP eCLIP22.68■■□□□ 1.22
COL6A2-208ENST00000485591 CIITAP33076 1130 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 TNFAIP2Q03169 654 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
COL6A2-208ENST00000485591 CEP55Q53EZ4 464 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 CCDC62Q6P9F0 684 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 KCNV1Q6PIU1 500 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 NIPA1Q7RTP0 329 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 MXRA8Q9BRK3 442 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 WDR11Q9BZH6 1224 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 MRVI1Q9Y6F6 885 aa22.68■■□□□ 1.22
COL6A2-208ENST00000485591 FAM205CA6NFA0 338 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 KIF28PB7ZC32 967 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 ARIH2O95376 493 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 TGFB3P10600 412 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 RARBP10826 455 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 SMPD1P17405 629 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 ZNF76P36508 570 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 ANP32AP39687 249 aaKnown RBP22.67■■□□□ 1.22
COL6A2-208ENST00000485591 DUSP28Q4G0W2 176 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 LHX8Q68G74 356 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 MOXD1Q6UVY6 613 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 NEK8Q86SG6 692 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 NOSTRINQ8IVI9 506 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 CDHR1Q96JP9 859 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 DEFB118Q96PH6 123 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 CENPFP49454 3210 aa22.67■■□□□ 1.22
COL6A2-208ENST00000485591 IGLV3-22A0A075B6J6 115 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 SPATA31C2B4DYI2 1134 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 FAM86B1E9PN63 330 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 MEIS1O00470 390 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 NKRFO15226 690 aaKnown RBP eCLIP22.66■■□□□ 1.22
COL6A2-208ENST00000485591 DUSP11O75319 330 aaKnown RBP22.66■■□□□ 1.22
COL6A2-208ENST00000485591 FAM86B2P0C5J1 330 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 TXNP10599 105 aaKnown RBP22.66■■□□□ 1.22
COL6A2-208ENST00000485591 SEMA3FQ13275 785 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 MTMR1Q13613 665 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 SPRYD3Q8NCJ5 442 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 LENG1Q96BZ8 264 aaPredicted RBP22.66■■□□□ 1.22
COL6A2-208ENST00000485591 TMEM106CQ9BVX2 250 aa22.66■■□□□ 1.22
COL6A2-208ENST00000485591 DDX41Q9UJV9 622 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms