RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 KCTD13Q8WZ19 329 aa5.19□□□□□ -1.58
SFPQ-209ENST00000485454 TRMT2BQ96GJ1 504 aaKnown RBP5.19□□□□□ -1.58
SFPQ-209ENST00000485454 C20orf173Q96LM9 149 aa5.19□□□□□ -1.58
SFPQ-209ENST00000485454 AP5M1Q9H0R1 490 aa5.19□□□□□ -1.58
SFPQ-209ENST00000485454 ZCCHC4Q9H5U6 513 aa5.19□□□□□ -1.58
SFPQ-209ENST00000485454 SIT1Q9Y3P8 196 aa5.19□□□□□ -1.58
SFPQ-209ENST00000485454 U2SURPO15042 1029 aaKnown RBP5.18□□□□□ -1.58
SFPQ-209ENST00000485454 SLC6A11P48066 632 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 LSAMPQ13449 338 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 VMACQ2NL98 169 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 NLRP10Q86W26 655 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 RIOX2Q8IUF8 465 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 MARCH10Q8NA82 808 aaPredicted RBP5.18□□□□□ -1.58
SFPQ-209ENST00000485454 CPA5Q8WXQ8 436 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 SEC14L1Q92503 715 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 TMEM169Q96HH4 297 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 AARSD1Q9BTE6 412 aaKnown RBP5.18□□□□□ -1.58
SFPQ-209ENST00000485454 IER2Q9BTL4 223 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 PPP1R1BQ9UD71 204 aaPredicted RBP5.18□□□□□ -1.58
SFPQ-209ENST00000485454 PMF1-BGLAPU3KQ54 211 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 X6R8D5 127 aa5.18□□□□□ -1.58
SFPQ-209ENST00000485454 H7BY64 318 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 SGSM2O43147 1006 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 DLX3O60479 287 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 TRIM13O60858 407 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 LCP1P13796 627 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 CACNB2Q08289 660 aaPredicted RBP5.17□□□□□ -1.58
SFPQ-209ENST00000485454 B3GNT8Q7Z7M8 397 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 LRRC47Q8N1G4 583 aaKnown RBP5.17□□□□□ -1.58
SFPQ-209ENST00000485454 LINC01356Q8N9X3 169 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 RELTQ969Z4 430 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 ZNF669Q96BR6 464 aaPredicted RBP5.17□□□□□ -1.58
SFPQ-209ENST00000485454 CHAMP1Q96JM3 812 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 KCNC2Q96PR1 638 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 FBXL7Q9UJT9 491 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 COA3Q9Y2R0 106 aaPredicted RBP5.17□□□□□ -1.58
SFPQ-209ENST00000485454 MSRB2Q9Y3D2 182 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 NPFFR2Q9Y5X5 522 aa5.17□□□□□ -1.58
SFPQ-209ENST00000485454 PLA2G1BP04054 148 aaKnown RBP5.16□□□□□ -1.58
SFPQ-209ENST00000485454 FGFR1P11362 822 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 HTRA3P83110 453 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 NBPF6Q5VWK0 638 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 SMARCC2Q8TAQ2 1214 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 FNIP1Q8TF40 1166 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 NBPF4Q96M43 638 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 ARHGEF4Q9NR80 690 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 GPR27Q9NS67 375 aa5.16□□□□□ -1.58
SFPQ-209ENST00000485454 TRAV20A0A0B4J274 112 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 A0A0G2JLL6 359 aaPredicted RBP5.15□□□□□ -1.59
SFPQ-209ENST00000485454 FFAR3O14843 346 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 PDPK1O15530 556 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 PRODHO43272 600 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 SASH1O94885 1247 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 GTF2F1P35269 517 aaKnown RBP eCLIP5.15□□□□□ -1.59
SFPQ-209ENST00000485454 CHRNA2Q15822 529 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 VWA3BQ502W6 1294 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 RSPO2Q6UXX9 243 aaPredicted RBP5.15□□□□□ -1.59
SFPQ-209ENST00000485454 ETV3LQ6ZN32 361 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 USP53Q70EK8 1073 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 MILR1Q7Z6M3 343 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 SP8Q8IXZ3 490 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 TP53I13Q8NBR0 393 aaPredicted RBP5.15□□□□□ -1.59
SFPQ-209ENST00000485454 ARMC5Q96C12 935 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 HIRIP3Q9BW71 556 aaPredicted RBP5.15□□□□□ -1.59
SFPQ-209ENST00000485454 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 CCDC113Q9H0I3 377 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 CLDND1Q9NY35 253 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 PALD1Q9ULE6 856 aa5.15□□□□□ -1.59
SFPQ-209ENST00000485454 PABPC1P11940 636 aaKnown RBP5.14□□□□□ -1.59
SFPQ-209ENST00000485454 RASGRF1Q13972 1273 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 NSMFQ6X4W1 530 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 SAPCD2Q86UD0 394 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 MIB1Q86YT6 1006 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 DCAF4Q8WV16 495 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 PHF20Q9BVI0 1012 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 SPATA9Q9BWV2 254 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 PCDH18Q9HCL0 1135 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 LUC7LQ9NQ29 371 aaKnown RBP5.14□□□□□ -1.59
SFPQ-209ENST00000485454 SIRPGQ9P1W8 387 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 ZNF652Q9Y2D9 606 aa5.14□□□□□ -1.59
SFPQ-209ENST00000485454 HGSO14964 777 aaPredicted RBP5.13□□□□□ -1.59
SFPQ-209ENST00000485454 DGKIO75912 1065 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 C8BP07358 591 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 CYP2C8P10632 490 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 IFRD2Q12894 506 aaPredicted RBP5.13□□□□□ -1.59
SFPQ-209ENST00000485454 NFIXQ14938 502 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 MTERF2Q49AM1 385 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 EMC4Q5J8M3 183 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 SPATC1Q76KD6 591 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 ZC3H18Q86VM9 953 aaKnown RBP5.13□□□□□ -1.59
SFPQ-209ENST00000485454 FAM126BQ8IXS8 530 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 OSBP2Q969R2 916 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 DDX11Q96FC9 970 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 NOX5Q96PH1 765 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 EPB41L1Q9H4G0 881 aa5.13□□□□□ -1.59
SFPQ-209ENST00000485454 SH3D21A4FU49 640 aa5.12□□□□□ -1.59
SFPQ-209ENST00000485454 CCDC85CA6NKD9 419 aa5.12□□□□□ -1.59
SFPQ-209ENST00000485454 FOXD2O60548 495 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms