RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KIAA1217Q5T5P2 1943 aa20.42■□□□□ 0.86
SREBF1-213ENST00000485080 SMCO2A6NFE2 343 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 MOXD2PA6NHM9 499 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 TGFB3P10600 412 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 CLK2P49760 499 aaKnown RBP20.41■□□□□ 0.86
SREBF1-213ENST00000485080 ADCY7P51828 1080 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 STK3Q13188 491 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 RABEP1Q15276 862 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 MCTP2Q6DN12 878 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 KCNV1Q6PIU1 500 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 TLK2Q86UE8 772 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 PCSK9Q8NBP7 692 aaKnown RBP20.41■□□□□ 0.86
SREBF1-213ENST00000485080 IL31RAQ8NI17 732 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 STK36Q9NRP7 1315 aa20.41■□□□□ 0.86
SREBF1-213ENST00000485080 SPDYE3A6NKU9 549 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 RGS20O76081 388 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 MRPS9P82933 396 aaKnown RBP20.4■□□□□ 0.86
SREBF1-213ENST00000485080 AP3B2Q13367 1082 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 C1orf53Q5VUE5 145 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 CCDC148Q8NFR7 591 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 INPP4AQ96PE3 977 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-213ENST00000485080 AP5M1Q9H0R1 490 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 LIMCH1Q9UPQ0 1083 aa20.4■□□□□ 0.86
SREBF1-213ENST00000485080 DYNC1LI2O43237 492 aaPredicted RBP20.39■□□□□ 0.85
SREBF1-213ENST00000485080 C6orf222P0C671 652 aaPredicted RBP20.39■□□□□ 0.85
SREBF1-213ENST00000485080 GNA11P29992 359 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 ICAM3P32942 547 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 UBE2SQ16763 222 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 TMEM63BQ5T3F8 832 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 NOL8Q76FK4 1167 aaKnown RBP20.39■□□□□ 0.85
SREBF1-213ENST00000485080 EMID1Q96A84 441 aaPredicted RBP20.39■□□□□ 0.85
SREBF1-213ENST00000485080 C6orf50Q9HD87 102 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 DDX41Q9UJV9 622 aaKnown RBP20.39■□□□□ 0.85
SREBF1-213ENST00000485080 PCDHA6Q9UN73 950 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 PCDHA8Q9Y5H6 950 aa20.39■□□□□ 0.85
SREBF1-213ENST00000485080 MYADML2A6NDP7 307 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 ARIH2O95376 493 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 CTDNEP1O95476 244 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 TXNP10599 105 aaKnown RBP20.38■□□□□ 0.85
SREBF1-213ENST00000485080 MYCLP12524 364 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-213ENST00000485080 ACLYP53396 1101 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 SNX17Q15036 470 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 KCNA10Q16322 511 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 FSCN1Q16658 493 aaKnown RBP20.38■□□□□ 0.85
SREBF1-213ENST00000485080 GNASQ5JWF2 1037 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 SEPT14Q6ZU15 432 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 BICD2Q8TD16 824 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 SENP6Q9GZR1 1112 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-213ENST00000485080 EHMT1Q9H9B1 1298 aa20.38■□□□□ 0.85
SREBF1-213ENST00000485080 ELP1O95163 1332 aa20.37■□□□□ 0.85
SREBF1-213ENST00000485080 A6NJR5 290 aa20.37■□□□□ 0.85
SREBF1-213ENST00000485080 ZEB2O60315 1214 aa20.37■□□□□ 0.85
SREBF1-213ENST00000485080 LARGE1O95461 756 aa20.37■□□□□ 0.85
SREBF1-213ENST00000485080 GNPTABQ3T906 1256 aa20.37■□□□□ 0.85
SREBF1-213ENST00000485080 ZSCAN31Q96LW9 406 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-213ENST00000485080 A0A1W2PQ45 241 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-213ENST00000485080 A0A1W2PQY0 241 aa20.36■□□□□ 0.85
SREBF1-213ENST00000485080 CABYRO75952 493 aa20.36■□□□□ 0.85
SREBF1-213ENST00000485080 CPT1AP50416 773 aa20.36■□□□□ 0.85
SREBF1-213ENST00000485080 GALNT17Q6IS24 598 aa20.36■□□□□ 0.85
SREBF1-213ENST00000485080 NECAB1Q8N987 351 aa20.36■□□□□ 0.85
SREBF1-213ENST00000485080 SH2B1Q9NRF2 756 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-213ENST00000485080 MRVI1Q9Y6F6 885 aa20.36■□□□□ 0.85
SREBF1-213ENST00000485080 SPATA31C2B4DYI2 1134 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 KPNA6O60684 536 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 GH1P01241 217 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 ASGR1P07306 291 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 SREBF1P36956 1147 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 IRX5P78411 483 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-213ENST00000485080 ARHGAP1Q07960 439 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 LRRC26Q2I0M4 334 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 BRDTQ58F21 947 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-213ENST00000485080 SLC39A5Q6ZMH5 540 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 REXO1Q8N1G1 1221 aaKnown RBP20.35■□□□□ 0.85
SREBF1-213ENST00000485080 OR6J1Q8NGC5 347 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 CRYGNQ8WXF5 182 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 SENP7Q9BQF6 1050 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 SEZ6LQ9BYH1 1024 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 ANO3Q9BYT9 981 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 VPS54Q9P1Q0 977 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 ALPK3Q96L96 1907 aa20.35■□□□□ 0.85
SREBF1-213ENST00000485080 MAFGO15525 162 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 FIBPO43427 364 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 ST18O60284 1047 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-213ENST00000485080 PTGS1P23219 599 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 LAMC2Q13753 1193 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 LY6KQ17RY6 165 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 DAGLBQ8NCG7 672 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 NSUN7Q8NE18 718 aaKnown RBP20.34■□□□□ 0.85
SREBF1-213ENST00000485080 WASF1Q92558 559 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 DPF3Q92784 378 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 GPRASP2Q96D09 838 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 CDHR1Q96JP9 859 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 GLT1D1Q96MS3 346 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 LLPHQ9BRT6 129 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms