RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 SERPINB2P05120 415 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 EEF1GP26641 437 aaKnown RBP16.47■□□□□ 0.23
RXRA-203ENST00000484822 SLC1A4P43007 532 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 TMED1Q13445 227 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 CHUKO15111 745 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 ADAM9Q13443 819 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 TPH2Q8IWU9 490 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 CDAN1Q8IWY9 1227 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
RXRA-203ENST00000484822 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 SKIP12755 728 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 TNNI1P19237 187 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 ADCY9O60503 1353 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 BBOX1O75936 387 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 MOCS3O95396 460 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 USH1GQ495M9 461 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
RXRA-203ENST00000484822 TSC22D3Q99576 134 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■■ 55.4
RXRA-203ENST00000484822 C1orf167Q5SNV9 1468 aa16.47■□□□□ 0.23
RXRA-203ENST00000484822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
RXRA-203ENST00000484822 TRPA1O75762 1119 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 FGAP02671 866 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 CYP27A1Q02318 531 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 USP17L21D6R901 530 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 KAZNQ674X7 775 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 CYP4F22Q6NT55 531 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 GABPB2Q8TAK5 448 aaPredicted RBP16.46■□□□□ 0.23
RXRA-203ENST00000484822 PUS3Q9BZE2 481 aaKnown RBP16.46■□□□□ 0.23
RXRA-203ENST00000484822 ST7Q9NRC1 585 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 DBNLQ9UJU6 430 aaKnown RBP16.46■□□□□ 0.23
RXRA-203ENST00000484822 MESDQ14696 234 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 NLRP7Q8WX94 980 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 MRPL46Q9H2W6 279 aaKnown RBP16.46■□□□□ 0.23
RXRA-203ENST00000484822 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
RXRA-203ENST00000484822 KRT19P08727 400 aa16.46■□□□□ 0.22
RXRA-203ENST00000484822 ZNF449Q6P9G9 518 aa16.46■□□□□ 0.22
RXRA-203ENST00000484822 NSUN7Q8NE18 718 aaKnown RBP16.46■□□□□ 0.22
RXRA-203ENST00000484822 AZI2Q9H6S1 392 aa16.46■□□□□ 0.22
RXRA-203ENST00000484822 TBK1Q9UHD2 729 aa16.46■□□□□ 0.22
RXRA-203ENST00000484822 INTUQ9ULD6 942 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 ZBTB22O15209 634 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 ACTN3Q08043 901 aaPredicted RBP16.45■□□□□ 0.22
RXRA-203ENST00000484822 TCP10Q12799 353 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 ALS2CLQ60I27 953 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 PGRMC1O00264 195 aaKnown RBP16.45■□□□□ 0.22
RXRA-203ENST00000484822 PHKA1P46020 1223 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.45■□□□□ 0.22
RXRA-203ENST00000484822 FAM26FQ5R3K3 315 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 SIRT2Q8IXJ6 389 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
RXRA-203ENST00000484822 LINC00301Q8NCQ3 95 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 DACT3Q96B18 629 aaPredicted RBP16.45■□□□□ 0.22
RXRA-203ENST00000484822 YIPF3Q9GZM5 350 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 NOP53Q9NZM5 478 aaKnown RBP16.45■□□□□ 0.22
RXRA-203ENST00000484822 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
RXRA-203ENST00000484822 PHEXP78562 749 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 ZBTB17Q13105 803 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 THEGQ9P2T0 379 aa16.45■□□□□ 0.22
RXRA-203ENST00000484822 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 YWHAGP61981 247 aaKnown RBP eCLIP16.44■□□□□ 0.22
RXRA-203ENST00000484822 PPM1KQ8N3J5 372 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 GDAP1Q8TB36 358 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
RXRA-203ENST00000484822 SAAL1Q96ER3 474 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 MAN1B1Q9UKM7 699 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 LARGE1O95461 756 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 BFSP1Q12934 665 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 EPC1Q9H2F5 836 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 NFU1Q9UMS0 254 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 BCORL1Q5H9F3 1711 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
RXRA-203ENST00000484822 NDUFA10O95299 355 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 CFBP00751 764 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 PCP11498 1178 aaKnown RBP16.44■□□□□ 0.22
RXRA-203ENST00000484822 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
RXRA-203ENST00000484822 EXOC3L4Q17RC7 722 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 ARHGEF18Q6ZSZ5 1173 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 CNOT10Q9H9A5 744 aaKnown RBP16.44■□□□□ 0.22
RXRA-203ENST00000484822 TNKSO95271 1327 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 PPP6R2O75170 966 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 TXLNGQ9NUQ3 528 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 GINS2Q9Y248 185 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 NEXMIFQ5QGS0 1516 aa16.44■□□□□ 0.22
RXRA-203ENST00000484822 TMED2Q15363 201 aa16.43■□□□□ 0.22
RXRA-203ENST00000484822 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms