RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CCDC178Q5BJE1 867 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 GNASQ5JWF2 1037 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 RCSD1Q6JBY9 416 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 FAM160B2Q86V87 743 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 CHD1LQ86WJ1 897 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 NCAPG2Q86XI2 1143 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 RIOX2Q8IUF8 465 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 ARRDC4Q8NCT1 418 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 IRF7Q92985 503 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 RNF41Q9H4P4 317 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-215ENST00000484203 C11orf49Q9H6J7 331 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 CLIP2Q9UDT6 1046 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 ZMYM6O95789 1325 aa7.27□□□□□ -1.24
PTCD3-215ENST00000484203 IGKV6D-41A0A0C4DH26 115 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 TSPY2A6NKD2 308 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 SPATA31C2B4DYI2 1134 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 H0YGN5 161 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 ORC4O43929 436 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 PLA2G6O60733 806 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 NDUFB10O96000 172 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 SLC1A4P43007 532 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 PHKA2P46019 1235 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 SEC13P55735 322 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 TFAP4Q01664 338 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 FAM83BQ5T0W9 1011 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 TAS1R3Q7RTX0 852 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 ANKMY2Q8IV38 441 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 CHST13Q8NET6 341 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 OTUD7AQ8TE49 926 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-215ENST00000484203 PBXIP1Q96AQ6 731 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 ATG4CQ96DT6 458 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 CEP95Q96GE4 821 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 GMCL1Q96IK5 515 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 PAWRQ96IZ0 340 aaKnown RBP7.27□□□□□ -1.25
PTCD3-215ENST00000484203 MMP19Q99542 508 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 EPB41L4AQ9HCS5 686 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-215ENST00000484203 DDX20Q9UHI6 824 aaKnown RBP7.27□□□□□ -1.25
PTCD3-215ENST00000484203 CTNNA3Q9UI47 895 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 CNPY2Q9Y2B0 182 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 PLIN4Q96Q06 1357 aa7.27□□□□□ -1.25
PTCD3-215ENST00000484203 BRCA2P51587 3418 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 DNM1LO00429 736 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 SEPT4O43236 478 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 DKK1O94907 266 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 CHGBP05060 677 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 FGRP09769 529 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 BMP3P12645 472 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 STAT2P52630 851 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 TMEM132BQ14DG7 1078 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 TKFCQ3LXA3 575 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 HABP4Q5JVS0 413 aaKnown RBP7.26□□□□□ -1.25
PTCD3-215ENST00000484203 TSEN2Q8NCE0 465 aaKnown RBP7.26□□□□□ -1.25
PTCD3-215ENST00000484203 RHBDD1Q8TEB9 315 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 RILPL2Q969X0 211 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 DDX11Q96FC9 970 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 TTC14Q96N46 770 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 LNPKQ9C0E8 428 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 DIAPH3Q9NSV4 1193 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 TCP11L1Q9NUJ3 509 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 ZNF214Q9UL59 606 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-215ENST00000484203 STX8Q9UNK0 236 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 CCDC171Q6TFL3 1326 aa7.26□□□□□ -1.25
PTCD3-215ENST00000484203 SLC35F4A4IF30 521 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 FAM181BA6NEQ2 426 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 H3BM21 787 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 M0R2N6 131 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 CDK2AP1O14519 115 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 RANBP6O60518 1105 aaKnown RBP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 PRDM1O75626 825 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 IGHA2P01877 340 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 FGAP02671 866 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 HSPD1P10809 573 aaKnown RBP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 CYBAP13498 195 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 SDSP20132 328 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 CNGA1P29973 690 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 IKQ13123 557 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 CCL14Q16627 93 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 KIAA1755Q5JYT7 1200 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 SLFN13Q68D06 897 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 SNRNP48Q6IEG0 339 aaKnown RBP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 MFSD6Q6ZSS7 791 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 CLEC10AQ8IUN9 316 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 FAM200AQ8TCP9 573 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 DCAF4Q8WV16 495 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 STAG1Q8WVM7 1258 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 RUFY2Q8WXA3 655 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 ESR2Q92731 530 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 MAML3Q96JK9 1138 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 SEC62Q99442 399 aaKnown RBP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 HINFPQ9BQA5 517 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 MAF1Q9H063 256 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 SLC38A10Q9HBR0 1119 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 TIMMDC1Q9NPL8 285 aa7.25□□□□□ -1.25
PTCD3-215ENST00000484203 NOVA2Q9UNW9 492 aaKnown RBP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTCD3-215ENST00000484203 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms