RNA–Protein interactions for RNA: ENST00000484098.5

STRADB-208, Transcript of STE20-related kinase adaptor beta, human

TSL 3

Gene STRADB, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADB-208	ENST00000484098	XPC	Q01831	940 aa	Predicted RBP	4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	PPP2R5D	Q14738	602 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	PPFIBP1	Q86W92	1011 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	CPNE8	Q86YQ8	564 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	REXO1	Q8N1G1	1221 aa	Known RBP	4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	ZG16B	Q96DA0	208 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	ZSWIM3	Q96MP5	696 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	FAM161B	Q96MY7	647 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	ADO	Q96SZ5	270 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	FAM86C1	Q9NVL1	165 aa		4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
STRADB-208	ENST00000484098	UNCX	A6NJT0	531 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	NARS	O43776	548 aa	Known RBP	4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	HSP90B1	P14625	803 aa	Known RBP	4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	CD247	P20963	164 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	IL13	P35225	146 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	EIF4A3	P38919	411 aa	Known RBP	4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	SEPHS1	P49903	392 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	PTH1R	Q03431	593 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	ADAM9	Q13443	819 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	LSM12	Q3MHD2	195 aa	Known RBP	4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	USP39	Q53GS9	565 aa	Known RBP	4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	ANKRD39	Q53RE8	183 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	NEU4	Q8WWR8	484 aa	Predicted RBP	4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	YIPF4	Q9BSR8	244 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	KCNQ5	Q9NR82	932 aa		4.26	□□□□□ -1.73
STRADB-208	ENST00000484098	AURKA	O14965	403 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	GREM1	O60565	184 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	TP53	P04637	393 aa	Predicted RBP	4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	ZNF165	P49910	485 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	NKX3-2	P78367	333 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	RBM10	P98175	930 aa	Known RBP	4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	KRTAP15-1	Q3LI76	137 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	FAM126B	Q8IXS8	530 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	KLHL36	Q8N4N3	616 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	NGRN	Q9NPE2	291 aa	Known RBP	4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	IGSF5	Q9NSI5	407 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	FTSJ1	Q9UET6	329 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	ZDHHC9	Q9Y397	364 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	ZNF451	Q9Y4E5	1061 aa		4.25	□□□□□ -1.73
STRADB-208	ENST00000484098	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	SGSM2	O43147	1006 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	NPHS1	O60500	1241 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	CYP7B1	O75881	506 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	APOBR	Q0VD83	1088 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	DPY19L2P1	Q6NXN4	242 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	TMC4	Q7Z404	712 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	VOPP1	Q96AW1	172 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	MRRF	Q96E11	262 aa	Known RBP	4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	CLIC6	Q96NY7	704 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	GNRHR2	Q96P88	292 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	PUS7	Q96PZ0	661 aa	Known RBP	4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	MCMBP	Q9BTE3	642 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	BARX1	Q9HBU1	254 aa	Predicted RBP	4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	COPRS	Q9NQ92	184 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	DLL4	Q9NR61	685 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	UBP1	Q9NZI7	540 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	CROT	Q9UKG9	612 aa		4.24	□□□□□ -1.73
STRADB-208	ENST00000484098	TRBV23OR9-2	A0A075B6M9	112 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	FOXS1	O43638	330 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	PAM	P19021	973 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	MLLT6	P55198	1093 aa	Predicted RBP	4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	NFATC3	Q12968	1075 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	TCEAL1	Q15170	157 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	CSRP2	Q16527	193 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	DPY19L1	Q2PZI1	675 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	INTS3	Q68E01	1043 aa	Known RBP	4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	ADCY4	Q8NFM4	1077 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	SEC14L1	Q92503	715 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	MARCH2	Q9P0N8	246 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	VTI1B	Q9UEU0	232 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	DIS3	Q9Y2L1	958 aa	Known RBP	4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	BACE2	Q9Y5Z0	518 aa		4.23	□□□□□ -1.73
STRADB-208	ENST00000484098	C7orf72	A4D263	438 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	DGCR2	P98153	550 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	CR1L	Q2VPA4	569 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	TCTN3	Q6NUS6	607 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	ERMP1	Q7Z2K6	904 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	MILR1	Q7Z6M3	343 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	SCUBE1	Q8IWY4	988 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	PLEKHO2	Q8TD55	490 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	EXTL1	Q92935	676 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	RNF34	Q969K3	372 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098	LRRC37B	Q96QE4	947 aa		4.22	□□□□□ -1.73
STRADB-208	ENST00000484098		A0A087WZG4	1122 aa		4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	C2orf71	A6NGG8	1288 aa		4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	SORBS3	O60504	671 aa		4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	CNOT4	O95628	575 aa	Known RBP	4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	CDK11B	P21127	795 aa	Known RBP	4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	TRMT10B	Q6PF06	316 aa	Known RBP	4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	RALYL	Q86SE5	291 aa	Known RBP	4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	LMF1	Q96S06	567 aa		4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	WRNIP1	Q96S55	665 aa		4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	BCL2L13	Q9BXK5	485 aa		4.21	□□□□□ -1.74
STRADB-208	ENST00000484098	SEC61A2	Q9H9S3	476 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms