RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 GCOM1H8Y6P7 765 aaPredicted RBP28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 SUPT20HL2P0C7V6 817 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 POLR2MP0CAP2 368 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 CYP2C9P11712 490 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 MYCLP12524 364 aaPredicted RBP28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 PGM5Q15124 567 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 RASIP1Q5U651 963 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 NFRKBQ6P4R8 1299 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 IL31RAQ8NI17 732 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 CTCFLQ8NI51 663 aaPredicted RBP28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 TMEM87BQ96K49 555 aa28.82■■■□□ 2.2
LYSMD4-207ENST00000484050 SPZ1Q9BXG8 430 aa28.81■■■□□ 2.2
LYSMD4-207ENST00000484050 MRVI1Q9Y6F6 885 aa28.81■■■□□ 2.2
LYSMD4-207ENST00000484050 RGS20O76081 388 aa28.8■■■□□ 2.2
LYSMD4-207ENST00000484050 KIF5BP33176 963 aa28.8■■■□□ 2.2
LYSMD4-207ENST00000484050 NFXL1Q6ZNB6 911 aa28.8■■■□□ 2.2
LYSMD4-207ENST00000484050 FCHSD1Q86WN1 690 aa28.8■■■□□ 2.2
LYSMD4-207ENST00000484050 SLC17A8Q8NDX2 589 aa28.8■■■□□ 2.2
LYSMD4-207ENST00000484050 SCN5AQ14524 2016 aa28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 CCDC69A6NI79 296 aa28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 CHMP4BP1P59074 171 aa28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 VSIG10LQ86VR7 867 aa28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 TMTC2Q8N394 836 aa28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 SCLYQ96I15 445 aa28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 CDX2Q99626 313 aaPredicted RBP28.79■■■□□ 2.2
LYSMD4-207ENST00000484050 PLEKHA8P1O95397 391 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 RXRAP19793 462 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 DNAJB2P25686 324 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 LIFRP42702 1097 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 PTPN11Q06124 597 aaPredicted RBP28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 HERVK_113Q902F9 699 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 KAT2BQ92831 832 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 EMID1Q96A84 441 aaPredicted RBP28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 RRP36Q96EU6 259 aaKnown RBP28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 ZFP91Q96JP5 570 aaPredicted RBP28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 LRRC2Q9BYS8 371 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 TANC1Q9C0D5 1861 aa28.78■■■□□ 2.2
LYSMD4-207ENST00000484050 GBF1Q92538 1859 aa28.77■■■□□ 2.2
LYSMD4-207ENST00000484050 GRXCR1A8MXD5 290 aa28.77■■■□□ 2.2
LYSMD4-207ENST00000484050 FGBP02675 491 aa28.77■■■□□ 2.2
LYSMD4-207ENST00000484050 SMARCA1P28370 1054 aa28.77■■■□□ 2.2
LYSMD4-207ENST00000484050 VWCEQ96DN2 955 aa28.77■■■□□ 2.2
LYSMD4-207ENST00000484050 CXXC1Q9P0U4 656 aaPredicted RBP28.77■■■□□ 2.2
LYSMD4-207ENST00000484050 TMEM265A0A087WTH1 108 aa28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 CASTP20810 708 aaKnown RBP28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 CCND2P30279 289 aa28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 LAMC2Q13753 1193 aa28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 DGKDQ16760 1214 aa28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 RAB11FIP4Q86YS3 637 aa28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 DHX37Q8IY37 1157 aaKnown RBP28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 CMTR1Q8N1G2 835 aaKnown RBP28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 SRBD1Q8N5C6 995 aaKnown RBP28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 LZTS2Q9BRK4 669 aa28.76■■■□□ 2.19
LYSMD4-207ENST00000484050 GNAQP50148 359 aa28.75■■■□□ 2.19
LYSMD4-207ENST00000484050 KCNV1Q6PIU1 500 aa28.75■■■□□ 2.19
LYSMD4-207ENST00000484050 OTOP2Q7RTS6 562 aa28.75■■■□□ 2.19
LYSMD4-207ENST00000484050 FRMPD4Q14CM0 1322 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 SORBS3O60504 671 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 CDC45O75419 566 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 PBX2P40425 430 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 RNF20Q5VTR2 975 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 RPUSD2Q8IZ73 545 aaKnown RBP28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 PPTC7Q8NI37 304 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 MYLIPQ8WY64 445 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 GPKOWQ92917 476 aaPredicted RBP eCLIP28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 SEC63Q9UGP8 760 aaKnown RBP28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 SLC12A7Q9Y666 1083 aa28.74■■■□□ 2.19
LYSMD4-207ENST00000484050 CALM1P0DP23 149 aa28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 CALM2P0DP24 149 aa28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 CALM3P0DP25 149 aa28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 SP2Q02086 613 aa28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 MYSM1Q5VVJ2 828 aa28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 PBX4Q9BYU1 374 aa28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 MTIF3Q9H2K0 278 aaKnown RBP28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 TRIP12Q14669 1992 aaPredicted RBP28.73■■■□□ 2.19
LYSMD4-207ENST00000484050 DOCK5Q9H7D0 1870 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 GGPS1O95749 300 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 ZNF286BP0CG31 522 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 UBA1P22314 1058 aaKnown RBP28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 PTGISQ16647 500 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 CELF3Q5SZQ8 465 aaKnown RBP28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 GDF6Q6KF10 455 aaPredicted RBP28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 USP17L6PQ6QN14 398 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 SESTD1Q86VW0 696 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 SGMS1Q86VZ5 419 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 TIFAQ96CG3 184 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 NEK1Q96PY6 1258 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 NOD1Q9Y239 953 aa28.72■■■□□ 2.19
LYSMD4-207ENST00000484050 CDH23Q9H251 3354 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 PITPNM1O00562 1244 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 TGFB3P10600 412 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 HOXD8P13378 290 aaPredicted RBP28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 MRPS9P82933 396 aaKnown RBP28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 HSDL1Q3SXM5 330 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 DEFB128Q7Z7B8 93 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 SMARCC2Q8TAQ2 1214 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 SPATA33Q96N06 139 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 CTAGE1Q96RT6 745 aa28.71■■■□□ 2.19
LYSMD4-207ENST00000484050 PSEN2P49810 448 aa28.7■■■□□ 2.18
LYSMD4-207ENST00000484050 MICU3Q86XE3 530 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms