RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 PCNX4Q63HM2 1172 aa18.67■□□□□ 0.58
COL2A1-206ENST00000483376 KCNV1Q6PIU1 500 aa18.67■□□□□ 0.58
COL2A1-206ENST00000483376 ZSCAN31Q96LW9 406 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-206ENST00000483376 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-206ENST00000483376 HTATIP2Q9BUP3 242 aa18.67■□□□□ 0.58
COL2A1-206ENST00000483376 C11orf49Q9H6J7 331 aa18.67■□□□□ 0.58
COL2A1-206ENST00000483376 EHMT1Q9H9B1 1298 aa18.67■□□□□ 0.58
COL2A1-206ENST00000483376 SH2B1Q9NRF2 756 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-206ENST00000483376 TNRC18O15417 2968 aaPredicted RBP18.66■□□□□ 0.58
COL2A1-206ENST00000483376 MOXD2PA6NHM9 499 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 SPDYE3A6NKU9 549 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 CTAGE5O15320 804 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 RGS20O76081 388 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 LARGE1O95461 756 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 CTDNEP1O95476 244 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 IL31RAQ8NI17 732 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 BICD2Q8TD16 824 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 DIS3LQ8TF46 1054 aaKnown RBP18.66■□□□□ 0.58
COL2A1-206ENST00000483376 LENG1Q96BZ8 264 aaPredicted RBP18.66■□□□□ 0.58
COL2A1-206ENST00000483376 C6orf50Q9HD87 102 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 PHF24Q9UPV7 400 aa18.66■□□□□ 0.58
COL2A1-206ENST00000483376 ST18O60284 1047 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 PGK1P00558 417 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 ICAM3P32942 547 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 MRPS9P82933 396 aaKnown RBP18.65■□□□□ 0.58
COL2A1-206ENST00000483376 UBE2SQ16763 222 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 C1orf53Q5VUE5 145 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 GALNT17Q6IS24 598 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 PCSK9Q8NBP7 692 aaKnown RBP18.65■□□□□ 0.58
COL2A1-206ENST00000483376 EMID1Q96A84 441 aaPredicted RBP18.65■□□□□ 0.58
COL2A1-206ENST00000483376 PCDHA6Q9UN73 950 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 PCDHA8Q9Y5H6 950 aa18.65■□□□□ 0.58
COL2A1-206ENST00000483376 MCM2P49736 904 aa18.64■□□□□ 0.57
COL2A1-206ENST00000483376 GNPTABQ3T906 1256 aa18.64■□□□□ 0.57
COL2A1-206ENST00000483376 GJC2Q5T442 439 aaPredicted RBP18.64■□□□□ 0.57
COL2A1-206ENST00000483376 DAGLBQ8NCG7 672 aa18.64■□□□□ 0.57
COL2A1-206ENST00000483376 NSUN7Q8NE18 718 aaKnown RBP18.64■□□□□ 0.57
COL2A1-206ENST00000483376 WASF1Q92558 559 aa18.64■□□□□ 0.57
COL2A1-206ENST00000483376 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.57
COL2A1-206ENST00000483376 AP5M1Q9H0R1 490 aa18.64■□□□□ 0.57
COL2A1-206ENST00000483376 KIAA1217Q5T5P2 1943 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 ARIH2O95376 493 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 C6orf222P0C671 652 aaPredicted RBP18.63■□□□□ 0.57
COL2A1-206ENST00000483376 TXNP10599 105 aaKnown RBP18.63■□□□□ 0.57
COL2A1-206ENST00000483376 MYCLP12524 364 aaPredicted RBP18.63■□□□□ 0.57
COL2A1-206ENST00000483376 SREBF1P36956 1147 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 ST3GAL1Q11201 340 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 SNX17Q15036 470 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 REXO1Q8N1G1 1221 aaKnown RBP18.63■□□□□ 0.57
COL2A1-206ENST00000483376 NECAB1Q8N987 351 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 CRYGNQ8WXF5 182 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 VPS54Q9P1Q0 977 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 DDX41Q9UJV9 622 aaKnown RBP18.63■□□□□ 0.57
COL2A1-206ENST00000483376 DNAH12Q6ZR08 3092 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 PDE4DIPQ5VU43 2346 aa18.63■□□□□ 0.57
COL2A1-206ENST00000483376 A6NJR5 290 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 MAFGO15525 162 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 DYNC1LI2O43237 492 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-206ENST00000483376 XBP1P17861 261 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 ACLYP53396 1101 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 FSCN1Q16658 493 aaKnown RBP18.62■□□□□ 0.57
COL2A1-206ENST00000483376 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
COL2A1-206ENST00000483376 GPRASP2Q96D09 838 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 CDHR1Q96JP9 859 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 ANO3Q9BYT9 981 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 ORC3Q9UBD5 711 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-206ENST00000483376 MRVI1Q9Y6F6 885 aa18.62■□□□□ 0.57
COL2A1-206ENST00000483376 ELP1O95163 1332 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 MYADML2A6NDP7 307 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 SPATA31C2B4DYI2 1134 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 FIBPO43427 364 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 ZEB2O60315 1214 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 CABYRO75952 493 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 GH1P01241 217 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 FDPSP14324 419 aaKnown RBP18.61■□□□□ 0.57
COL2A1-206ENST00000483376 CPT1AP50416 773 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 KCNA10Q16322 511 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 GNASQ5JWF2 1037 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 TMEM63BQ5T3F8 832 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 NLRX1Q86UT6 975 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 SENP7Q9BQF6 1050 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 SEZ6LQ9BYH1 1024 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 PCDHA4Q9UN74 947 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 UBIAD1Q9Y5Z9 338 aa18.61■□□□□ 0.57
COL2A1-206ENST00000483376 M0R2N6 131 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 KPNA6O60684 536 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 PPFIA3O75145 1194 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 CYP3A4P08684 503 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 NLRP5P59047 1200 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 ARHGAP1Q07960 439 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 NPY5RQ15761 445 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 BRDTQ58F21 947 aaPredicted RBP18.6■□□□□ 0.57
COL2A1-206ENST00000483376 NIPA1Q7RTP0 329 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 OR6J1Q8NGC5 347 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 PHF20Q9BVI0 1012 aa18.6■□□□□ 0.57
COL2A1-206ENST00000483376 SENP6Q9GZR1 1112 aaPredicted RBP18.6■□□□□ 0.57
COL2A1-206ENST00000483376 A0A1W2PQ45 241 aaPredicted RBP18.59■□□□□ 0.57
COL2A1-206ENST00000483376 A0A1W2PQY0 241 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms