RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 HELLSQ9NRZ9 838 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 MTUS1Q9ULD2 1270 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 MYH4Q9Y623 1939 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 WDR19Q8NEZ3 1342 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 NBNO60934 754 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 GH1P01241 217 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 MMP3P08254 477 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 SNHG28P0DPA3 235 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 SELPP16109 830 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 CASTP20810 708 aaKnown RBP8.66□□□□□ -1.02
CSDE1-206ENST00000483030 ARHGAP1Q07960 439 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 TCTN1Q2MV58 587 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 MCMDC2Q4G0Z9 681 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 ANKRD45Q5TZF3 282 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 LRRC8DQ7L1W4 858 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 SESTD1Q86VW0 696 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 GDPD5Q8WTR4 605 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
CSDE1-206ENST00000483030 RAD9AQ99638 391 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 CD320Q9NPF0 282 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 LMCD1Q9NZU5 365 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 HDAC6Q9UBN7 1215 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 HCN4Q9Y3Q4 1203 aa8.66□□□□□ -1.02
CSDE1-206ENST00000483030 SALL3Q9BXA9 1300 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 TCF20Q9UGU0 1960 aaKnown RBP8.65□□□□□ -1.02
CSDE1-206ENST00000483030 A0A0D9SFI3 127 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 ABHD14A-ACY1A0A1B0GW23 586 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 FAM86C2PA6NEL3 165 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 GPR37L1O60883 481 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 GJB5O95377 273 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 HSPD1P10809 573 aaKnown RBP8.65□□□□□ -1.02
CSDE1-206ENST00000483030 CKBP12277 381 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 STXBP2Q15833 593 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 DGKDQ16760 1214 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
CSDE1-206ENST00000483030 FAM117BQ6P1L5 589 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 CNKSR3Q6P9H4 555 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 C7orf31Q8N865 590 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 SYTL5Q8TDW5 730 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-206ENST00000483030 NSUN6Q8TEA1 469 aaKnown RBP8.65□□□□□ -1.02
CSDE1-206ENST00000483030 RMDN3Q96TC7 470 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 C11orf16Q9NQ32 467 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 COL20A1Q9P218 1284 aa8.65□□□□□ -1.02
CSDE1-206ENST00000483030 ZBTB47Q9UFB7 747 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-206ENST00000483030 XIRP2A4UGR9 3374 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 CXCL10P02778 98 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 PSEN2P49810 448 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 PDE1AP54750 535 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 ERVK-21P61565 698 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 ZNF200P98182 395 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 NMIQ13287 307 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 IKBKEQ14164 716 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 MFSD10Q14728 455 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 CDC37Q16543 378 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 ZNF618Q5T7W0 954 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 ZNF589Q86UQ0 364 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 MCF2L2Q86YR7 1114 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 TBC1D10CQ8IV04 446 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 ADGRF4Q8IZF3 695 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 TGS1Q96RS0 853 aaKnown RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 IWS1Q96ST2 819 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 CRBNQ96SW2 442 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 VAT1LQ9HCJ6 419 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 GTF2IRD1Q9UHL9 959 aa8.64□□□□□ -1.03
CSDE1-206ENST00000483030 DDX41Q9UJV9 622 aaKnown RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-206ENST00000483030 LRRC37A2A6NM11 1700 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 ABCB11O95342 1321 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 LINC01553A4QN01 128 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 PI4K2BG5E9Z4 385 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 EFCAB14O75071 495 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 EIF3JO75822 258 aaKnown RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 NR3C2P08235 984 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 ZNF286BP0CG31 522 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 PCP11498 1178 aaKnown RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 EIF2AK2P19525 551 aaKnown RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 KCNA5P22460 613 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 RBL2Q08999 1139 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 PTK7Q13308 1070 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 LAMC2Q13753 1193 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 MBTPS1Q14703 1052 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 KIAA0753Q2KHM9 967 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 ARHGEF16Q5VV41 709 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.63□□□□□ -1.033e-13■■■■□ 22
CSDE1-206ENST00000483030 DGKHQ86XP1 1220 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 DHX37Q8IY37 1157 aaKnown RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 ESR2Q92731 530 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 WNT8BQ93098 351 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 RNF41Q9H4P4 317 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 UBE2ZQ9H832 354 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-206ENST00000483030 MRPL11Q9Y3B7 192 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms