RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 SLC43A3Q8NBI5 491 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
VARS-225ENST00000482996 GOLGA8AA7E2F4 631 aa16■□□□□ 0.15
VARS-225ENST00000482996 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
VARS-225ENST00000482996 RCAN1P53805 252 aa16■□□□□ 0.15
VARS-225ENST00000482996 PURAQ00577 322 aaKnown RBP16■□□□□ 0.15
VARS-225ENST00000482996 LY6KQ17RY6 165 aa16■□□□□ 0.15
VARS-225ENST00000482996 LRIT3Q3SXY7 679 aa16■□□□□ 0.15
VARS-225ENST00000482996 FAM126BQ8IXS8 530 aa16■□□□□ 0.15
VARS-225ENST00000482996 TBX21Q9UL17 535 aa16■□□□□ 0.15
VARS-225ENST00000482996 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
VARS-225ENST00000482996 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 TIMP1P01033 207 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 PSMC6P62333 389 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 Q6ZUG5 572 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 HEATR3Q7Z4Q2 680 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 IL31RAQ8NI17 732 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 AFG1LQ8WV93 481 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
VARS-225ENST00000482996 DDX41Q9UJV9 622 aaKnown RBP15.99■□□□□ 0.15
VARS-225ENST00000482996 LTBP2Q14767 1821 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 GRIN2DO15399 1336 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 hCG_1642624A0A1W2PR95 340 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 STAM2O75886 525 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 CD4P01730 458 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 CPA1P15085 419 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
VARS-225ENST00000482996 RPS6KB1P23443 525 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 ITGB8P26012 769 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 FPGSQ05932 587 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 ARHGAP1Q07960 439 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 GNPTABQ3T906 1256 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 USP17L6PQ6QN14 398 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
VARS-225ENST00000482996 BRF1Q92994 677 aa15.98■□□□□ 0.15
VARS-225ENST00000482996 LAMA3Q16787 3333 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 FRMPD4Q14CM0 1322 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 CNTNAP5Q8WYK1 1306 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 SOX1O00570 391 aaPredicted RBP15.97■□□□□ 0.15
VARS-225ENST00000482996 MEIS2O14770 477 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 MMP3P08254 477 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 SUPT20HL2P0C7V6 817 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 TGFB3P10600 412 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.153e-7■■■■□ 24.8
VARS-225ENST00000482996 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 MFSD5Q6N075 450 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 XRRA1Q6P2D8 792 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
VARS-225ENST00000482996 TRPV6Q9H1D0 765 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
VARS-225ENST00000482996 KIAA1217Q5T5P2 1943 aa15.97■□□□□ 0.15
VARS-225ENST00000482996 RGS20O76081 388 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 PPIGQ13427 754 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■■■■□ 23.3
VARS-225ENST00000482996 DGKDQ16760 1214 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 FAM47CQ5HY64 1035 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 FBXL16Q8N461 479 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 TMEM199Q8N511 208 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
VARS-225ENST00000482996 LRCH3Q96II8 777 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 USP26Q9BXU7 913 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 PPP1R12CQ9BZL4 782 aa15.96■□□□□ 0.15
VARS-225ENST00000482996 V9GY48 417 aaPredicted RBP15.96■□□□□ 0.15
VARS-225ENST00000482996 SPDYE3A6NKU9 549 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 hCG_1984214I3L0E3 225 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 B4GALT4O60513 344 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 GGPS1O95749 300 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 NAPAP54920 295 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 CHMP4BP1P59074 171 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 PTPN11Q06124 597 aaPredicted RBP15.95■□□□□ 0.14
VARS-225ENST00000482996 FUT2Q10981 343 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 SHHQ15465 462 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 CELF3Q5SZQ8 465 aaKnown RBP15.95■□□□□ 0.14
VARS-225ENST00000482996 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 PPP1R18Q6NYC8 613 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 NFRKBQ6P4R8 1299 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 TEX2Q8IWB9 1127 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 ZNF713Q8N859 430 aaPredicted RBP15.95■□□□□ 0.14
VARS-225ENST00000482996 PPTC7Q8NI37 304 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 ZFP91Q96JP5 570 aaPredicted RBP15.95■□□□□ 0.14
VARS-225ENST00000482996 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
VARS-225ENST00000482996 HIPK3Q9H422 1215 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 EHMT1Q9H9B1 1298 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 CYP46A1Q9Y6A2 500 aa15.95■□□□□ 0.14
VARS-225ENST00000482996 UBA1P22314 1058 aaKnown RBP15.94■□□□□ 0.14
VARS-225ENST00000482996 CDC27P30260 824 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 ADD1P35611 737 aaKnown RBP15.94■□□□□ 0.14
VARS-225ENST00000482996 MRPS9P82933 396 aaKnown RBP15.94■□□□□ 0.14
VARS-225ENST00000482996 UBE2SQ16763 222 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 C9orf50Q5SZB4 431 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 MYSM1Q5VVJ2 828 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 WWC2Q6AWC2 1192 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 GPR153Q6NV75 609 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 NLRX1Q86UT6 975 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 SPATA33Q96N06 139 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms