RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 KPNA6O60684 536 aa27.14■■□□□ 1.94
RHBDF1-208ENST00000482904 EXOSC10Q01780 885 aaKnown RBP27.14■■□□□ 1.94
RHBDF1-208ENST00000482904 FAM47CQ5HY64 1035 aa27.14■■□□□ 1.94
RHBDF1-208ENST00000482904 IL31RAQ8NI17 732 aa27.14■■□□□ 1.94
RHBDF1-208ENST00000482904 JAKMIP1Q96N16 626 aaKnown RBP27.14■■□□□ 1.94
RHBDF1-208ENST00000482904 RBM28Q9NW13 759 aaKnown RBP27.14■■□□□ 1.94
RHBDF1-208ENST00000482904 GRIN2DO15399 1336 aa27.14■■□□□ 1.93
RHBDF1-208ENST00000482904 HSPA4P34932 840 aa27.13■■□□□ 1.93
RHBDF1-208ENST00000482904 SHHQ15465 462 aa27.13■■□□□ 1.93
RHBDF1-208ENST00000482904 RTN1Q16799 776 aa27.13■■□□□ 1.93
RHBDF1-208ENST00000482904 C9orf50Q5SZB4 431 aa27.13■■□□□ 1.93
RHBDF1-208ENST00000482904 AFG1LQ8WV93 481 aa27.13■■□□□ 1.93
RHBDF1-208ENST00000482904 BAZ2BQ9UIF8 2168 aaKnown RBP27.13■■□□□ 1.93
RHBDF1-208ENST00000482904 KLF18A0A0U1RQI7 1052 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 hCG_1642624A0A1W2PR95 340 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 GOLGA8AA7E2F4 631 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 GOLGA8BA8MQT2 603 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 CD4P01730 458 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 CHMP4BP1P59074 171 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 ARHGAP1Q07960 439 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 HEATR3Q7Z4Q2 680 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 TRPV6Q9H1D0 765 aa27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 DDX41Q9UJV9 622 aaKnown RBP27.12■■□□□ 1.93
RHBDF1-208ENST00000482904 B4GALT4O60513 344 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 MMP3P08254 477 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 ERICH6BQ5W0A0 696 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 MFSD5Q6N075 450 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 VSIG10LQ86VR7 867 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 TMEM199Q8N511 208 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 RNPC3Q96LT9 517 aaKnown RBP27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 ALDH8A1Q9H2A2 487 aaPredicted RBP27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 HIPK3Q9H422 1215 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 BRPF3Q9ULD4 1205 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 SNX14Q9Y5W7 946 aa27.11■■□□□ 1.93
RHBDF1-208ENST00000482904 CPA1P15085 419 aa27.1■■□□□ 1.93
RHBDF1-208ENST00000482904 PPIGQ13427 754 aaKnown RBP eCLIP27.1■■□□□ 1.93
RHBDF1-208ENST00000482904 KCNV1Q6PIU1 500 aa27.1■■□□□ 1.93
RHBDF1-208ENST00000482904 USP17L6PQ6QN14 398 aa27.1■■□□□ 1.93
RHBDF1-208ENST00000482904 BLOC1S2Q6QNY1 142 aa27.1■■□□□ 1.93
RHBDF1-208ENST00000482904 DHX37Q8IY37 1157 aaKnown RBP27.1■■□□□ 1.93
RHBDF1-208ENST00000482904 EPHB4P54760 987 aa27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 NBPF20Q3BBV1 942 aa27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 GNPTABQ3T906 1256 aa27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 KCNB2Q92953 911 aa27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 ZFP91Q96JP5 570 aaPredicted RBP27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 FRMPD4Q14CM0 1322 aa27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 CNTNAP5Q8WYK1 1306 aa27.09■■□□□ 1.93
RHBDF1-208ENST00000482904 LAMA3Q16787 3333 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 SORBS3O60504 671 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 RGS20O76081 388 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 SUPT20HL2P0C7V6 817 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 CASTP20810 708 aaKnown RBP27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 CYP2C18P33260 490 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 LAMC2Q13753 1193 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 DGKDQ16760 1214 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 GPR153Q6NV75 609 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 GPKOWQ92917 476 aaPredicted RBP eCLIP27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 EMID1Q96A84 441 aaPredicted RBP27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 PSTPIP2Q9H939 334 aa27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 TRMT13Q9NUP7 481 aaKnown RBP27.08■■□□□ 1.93
RHBDF1-208ENST00000482904 PIK3CDO00329 1044 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 CSF2RAP15509 400 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 PSMA5P28066 241 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 Q6ZUG5 572 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 PPP1R13LQ8WUF5 828 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 NOD1Q9Y239 953 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 KIAA1217Q5T5P2 1943 aa27.07■■□□□ 1.92
RHBDF1-208ENST00000482904 STAM2O75886 525 aa27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 GGPS1O95749 300 aa27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 UBA1P22314 1058 aaKnown RBP27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 METAP2P50579 478 aaKnown RBP eCLIP27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 RCAN1P53805 252 aa27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 NFRKBQ6P4R8 1299 aa27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 PPTC7Q8NI37 304 aa27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 BRF1Q92994 677 aa27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 NOC4LQ9BVI4 516 aaKnown RBP27.06■■□□□ 1.92
RHBDF1-208ENST00000482904 MEIS2O14770 477 aa27.05■■□□□ 1.92
RHBDF1-208ENST00000482904 RPS6KB1P23443 525 aa27.05■■□□□ 1.92
RHBDF1-208ENST00000482904 APOBRQ0VD83 1088 aa27.05■■□□□ 1.92
RHBDF1-208ENST00000482904 DEFB123Q8N688 67 aa27.05■■□□□ 1.92
RHBDF1-208ENST00000482904 SPATA33Q96N06 139 aa27.05■■□□□ 1.92
RHBDF1-208ENST00000482904 SPDYE3A6NKU9 549 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 ZNF286BP0CG31 522 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 TGFB3P10600 412 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 NAPAP54920 295 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 PTPN11Q06124 597 aaPredicted RBP27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 UBE2SQ16763 222 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 CELF3Q5SZQ8 465 aaKnown RBP27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 WWC2Q6AWC2 1192 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 PSRC1Q6PGN9 363 aaPredicted RBP27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 MLXIPQ9HAP2 919 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 RTEL1Q9NZ71 1219 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 UMODL1Q5DID0 1318 aa27.04■■□□□ 1.92
RHBDF1-208ENST00000482904 CYP2C9P11712 490 aa27.03■■□□□ 1.92
RHBDF1-208ENST00000482904 CCL23P55773 120 aa27.03■■□□□ 1.92
RHBDF1-208ENST00000482904 MRPS9P82933 396 aaKnown RBP27.03■■□□□ 1.92
RHBDF1-208ENST00000482904 PCNX4Q63HM2 1172 aa27.03■■□□□ 1.92
RHBDF1-208ENST00000482904 Q7L0L9 218 aa27.03■■□□□ 1.92
RHBDF1-208ENST00000482904 INPP4AQ96PE3 977 aaPredicted RBP27.03■■□□□ 1.92
RHBDF1-208ENST00000482904 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.03■■□□□ 1.929e-7■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms