RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 C6orf222P0C671 652 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-214ENST00000482733 TXNP10599 105 aaKnown RBP19.03■□□□□ 0.64
HMGN1-214ENST00000482733 GNA11P29992 359 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 ME3Q16798 604 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 MCTP2Q6DN12 878 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 SEPT14Q6ZU15 432 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 GTF3C6Q969F1 213 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 SENP6Q9GZR1 1112 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-214ENST00000482733 ZMYND12Q9H0C1 365 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 LIMCH1Q9UPQ0 1083 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 PHF24Q9UPV7 400 aa19.03■□□□□ 0.64
HMGN1-214ENST00000482733 MKI67P46013 3256 aaKnown RBP19.03■□□□□ 0.64
HMGN1-214ENST00000482733 DYNC1LI2O43237 492 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-214ENST00000482733 ZEB2O60315 1214 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 AP3B2Q13367 1082 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 UBE2SQ16763 222 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 GNPTABQ3T906 1256 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 PCNX4Q63HM2 1172 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 BICD2Q8TD16 824 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 TBC1D32Q96NH3 1257 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 PCDHA6Q9UN73 950 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 PCDHA8Q9Y5H6 950 aa19.02■□□□□ 0.64
HMGN1-214ENST00000482733 LRRC37A2A6NM11 1700 aa19.02■□□□□ 0.63
HMGN1-214ENST00000482733 STK36Q9NRP7 1315 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 ST18O60284 1047 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 PPFIA3O75145 1194 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 FSCN1Q16658 493 aaKnown RBP19.01■□□□□ 0.63
HMGN1-214ENST00000482733 BRDTQ58F21 947 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-214ENST00000482733 GNASQ5JWF2 1037 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 CCSAPQ6IQ19 270 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-214ENST00000482733 CCDC62Q6P9F0 684 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 IL31RAQ8NI17 732 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 DPF3Q92784 378 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 ZSCAN31Q96LW9 406 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-214ENST00000482733 MRVI1Q9Y6F6 885 aa19.01■□□□□ 0.63
HMGN1-214ENST00000482733 TGFB3P10600 412 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 CPT1AP50416 773 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 KCNA10Q16322 511 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 NECAB1Q8N987 351 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 OR6J1Q8NGC5 347 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 WASF1Q92558 559 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 DDX41Q9UJV9 622 aaKnown RBP19■□□□□ 0.63
HMGN1-214ENST00000482733 MCM3APO60318 1980 aa19■□□□□ 0.63
HMGN1-214ENST00000482733 MYADML2A6NDP7 307 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 CTAGE5O15320 804 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 ARIH2O95376 493 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 LARGE1O95461 756 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 GH1P01241 217 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 XBP1P17861 261 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 CLK2P49760 499 aaKnown RBP18.99■□□□□ 0.63
HMGN1-214ENST00000482733 ACLYP53396 1101 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 MRPS9P82933 396 aaKnown RBP18.99■□□□□ 0.63
HMGN1-214ENST00000482733 TMEM63BQ5T3F8 832 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 NLRX1Q86UT6 975 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 REXO1Q8N1G1 1221 aaKnown RBP18.99■□□□□ 0.63
HMGN1-214ENST00000482733 INPP4AQ96PE3 977 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-214ENST00000482733 ANO3Q9BYT9 981 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 SH2B1Q9NRF2 756 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-214ENST00000482733 VPS54Q9P1Q0 977 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 FRMPD3Q5JV73 1810 aa18.99■□□□□ 0.63
HMGN1-214ENST00000482733 A0A1W2PQ45 241 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-214ENST00000482733 A0A1W2PQY0 241 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 CABYRO75952 493 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 RGS20O76081 388 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 CTDNEP1O95476 244 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 ASGR1P07306 291 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 ICAM3P32942 547 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 NLRP5P59047 1200 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 LY6KQ17RY6 165 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 GALNT17Q6IS24 598 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 CDHR1Q96JP9 859 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 GLT1D1Q96MS3 346 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 NR2E3Q9Y5X4 410 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 ELP1O95163 1332 aa18.98■□□□□ 0.63
HMGN1-214ENST00000482733 FIBPO43427 364 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 EVI5O60447 810 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 KPNA6O60684 536 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 BEX3Q00994 111 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 LAMC2Q13753 1193 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 C1orf53Q5VUE5 145 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 SLC39A5Q6ZMH5 540 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 EMID1Q96A84 441 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-214ENST00000482733 FERMT2Q96AC1 680 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 STARD7Q9NQZ5 370 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 POLR3EQ9NVU0 708 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 RTEL1Q9NZ71 1219 aa18.97■□□□□ 0.63
HMGN1-214ENST00000482733 ORC3Q9UBD5 711 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-214ENST00000482733 A6NJR5 290 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 SPATA31C2B4DYI2 1134 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 MAFGO15525 162 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 SREBF1P36956 1147 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 MCM2P49736 904 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 ATN1P54259 1190 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-214ENST00000482733 IRX5P78411 483 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-214ENST00000482733 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 SNX17Q15036 470 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 LRRC26Q2I0M4 334 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 JAKMIP3Q5VZ66 844 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 DHX37Q8IY37 1157 aaKnown RBP18.96■□□□□ 0.63
HMGN1-214ENST00000482733 NSUN7Q8NE18 718 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms