RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 GRB10Q13322 594 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 DACT2Q5SW24 774 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 AMOTL1Q8IY63 956 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 TBC1D22AQ8WUA7 517 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-220ENST00000482507 COL4A5P29400 1685 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 BICDL2A1A5D9 508 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 EIF3CLB5ME19 914 aaKnown RBP16.57■□□□□ 0.24
ATG4B-220ENST00000482507 KRT83P78385 493 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 NEDD1Q8NHV4 660 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 PURBQ96QR8 312 aaKnown RBP16.57■□□□□ 0.24
ATG4B-220ENST00000482507 EIF3CQ99613 913 aaKnown RBP16.57■□□□□ 0.24
ATG4B-220ENST00000482507 C6orf50Q9HD87 102 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 PSD3Q9NYI0 1048 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 MYMKA6NI61 221 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 TXKP42681 527 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 RETREG2Q8NC44 543 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 SMCR8Q8TEV9 937 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-220ENST00000482507 TRERF1Q96PN7 1200 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 PNMA5Q96PV4 448 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 ERGIC2Q96RQ1 377 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 ZMYND10O75800 440 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-220ENST00000482507 GPS2Q13227 327 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 RRP36Q96EU6 259 aaKnown RBP16.56■□□□□ 0.24
ATG4B-220ENST00000482507 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-220ENST00000482507 MTMR9Q96QG7 549 aa16.56■□□□□ 0.24
ATG4B-220ENST00000482507 MACROD2A1Z1Q3 448 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 KRT86O43790 486 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 SLC37A4O43826 429 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 PHACTR2O75167 634 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 CENPPQ6IPU0 288 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 TEX11Q8IYF3 940 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 CCDC170Q8IYT3 715 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 NUDT12Q9BQG2 462 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 GPR75-ASB3A0A0A6YYF3 556 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 GNA11P29992 359 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 RHBDL3P58872 404 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 ZSCAN26Q16670 478 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 GRIPAP1Q4V328 841 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 MUM1L1Q5H9M0 696 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 GLIS3Q8NEA6 775 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 ZNHIT6Q9NWK9 470 aaKnown RBP16.55■□□□□ 0.24
ATG4B-220ENST00000482507 ARHGAP20Q9P2F6 1191 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 LRWD1Q9UFC0 647 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 SIK3Q9Y2K2 1263 aa16.55■□□□□ 0.24
ATG4B-220ENST00000482507 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-220ENST00000482507 A0A1W2PQJ5 194 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
ATG4B-220ENST00000482507 TDP2O95551 362 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 LDHCP07864 332 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 MYBL2P10244 700 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 COBLL1Q53SF7 1204 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 FIGNQ5HY92 759 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 REXO1Q8N1G1 1221 aaKnown RBP16.54■□□□□ 0.24
ATG4B-220ENST00000482507 COA7Q96BR5 231 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 TULP2O00295 520 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 ERCC3P19447 782 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 IRX5P78411 483 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-220ENST00000482507 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 DYMQ7RTS9 669 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 KCNK18Q7Z418 384 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 FAM114A1Q8IWE2 563 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 GSPT2Q8IYD1 628 aaKnown RBP16.54■□□□□ 0.24
ATG4B-220ENST00000482507 CCDC102AQ96A19 550 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
ATG4B-220ENST00000482507 DAGLAQ9Y4D2 1042 aa16.54■□□□□ 0.24
ATG4B-220ENST00000482507 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
ATG4B-220ENST00000482507 POTEMA6NI47 508 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
ATG4B-220ENST00000482507 CAPN2P17655 700 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 NOVP48745 357 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 VAV2P52735 878 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.242e-12■■■□□ 18.6
ATG4B-220ENST00000482507 CDK17Q00537 523 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 GDAP1L1Q96MZ0 367 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-220ENST00000482507 SEC63Q9UGP8 760 aaKnown RBP16.53■□□□□ 0.24
ATG4B-220ENST00000482507 ZNRF3Q9ULT6 936 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 TUBBP07437 444 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 CXCL9Q07325 125 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 RAD51AP2Q09MP3 1159 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
ATG4B-220ENST00000482507 SV2BQ7L1I2 683 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms