RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 COPS5Q92905 334 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 CUL5Q93034 780 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 MTG1Q9BT17 334 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-213ENST00000482192 TBX21Q9UL17 535 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 FRMPD4Q14CM0 1322 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 GOLGA8BA8MQT2 603 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 MYL3P08590 195 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 CPA1P15085 419 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 PSMC6P62333 389 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 KCNV1Q6PIU1 500 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
HMGN1-213ENST00000482192 DDX41Q9UJV9 622 aaKnown RBP13.7□□□□□ -0.22
HMGN1-213ENST00000482192 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 STAM2O75886 525 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 TIMP1P01033 207 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 CD4P01730 458 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
HMGN1-213ENST00000482192 ITGB8P26012 769 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 Q6ZUG5 572 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 FBXL16Q8N461 479 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 AFG1LQ8WV93 481 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 BRF1Q92994 677 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 EMID1Q96A84 441 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-213ENST00000482192 PSTPIP2Q9H939 334 aa13.69□□□□□ -0.22
HMGN1-213ENST00000482192 NAP1L2Q9ULW6 460 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-213ENST00000482192 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 SOX1O00570 391 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-213ENST00000482192 MEIS2O14770 477 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 RGS20O76081 388 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 MMP3P08254 477 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 TGFB3P10600 412 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 METAP2P50579 478 aaKnown RBP eCLIP13.68□□□□□ -0.22
HMGN1-213ENST00000482192 FPGSQ05932 587 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 LAMC2Q13753 1193 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
HMGN1-213ENST00000482192 hCG_1984214I3L0E3 225 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 B4GALT4O60513 344 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 FUT2Q10981 343 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 DGKDQ16760 1214 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 PCNX4Q63HM2 1172 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 MFSD5Q6N075 450 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 PPP1R18Q6NYC8 613 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 XRRA1Q6P2D8 792 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 NFRKBQ6P4R8 1299 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 DHX37Q8IY37 1157 aaKnown RBP13.67□□□□□ -0.22
HMGN1-213ENST00000482192 ZNF713Q8N859 430 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-213ENST00000482192 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 20.4
HMGN1-213ENST00000482192 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 TRPV6Q9H1D0 765 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-213ENST00000482192 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-213ENST00000482192 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-213ENST00000482192 NID2Q14112 1375 aa13.67□□□□□ -0.22
HMGN1-213ENST00000482192 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 SUPT20HL2P0C7V6 817 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
HMGN1-213ENST00000482192 CDC27P30260 824 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 NAPAP54920 295 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 MRPS9P82933 396 aaKnown RBP13.66□□□□□ -0.22
HMGN1-213ENST00000482192 PTPN11Q06124 597 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-213ENST00000482192 SHHQ15465 462 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 FAM47CQ5HY64 1035 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 CELF3Q5SZQ8 465 aaKnown RBP13.66□□□□□ -0.22
HMGN1-213ENST00000482192 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 RUFY3Q7L099 469 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 TMEM199Q8N511 208 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-213ENST00000482192 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-213ENST00000482192 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 CYP46A1Q9Y6A2 500 aa13.66□□□□□ -0.22
HMGN1-213ENST00000482192 KIAA1217Q5T5P2 1943 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 FIBPO43427 364 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 GGPS1O95749 300 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 ICAM3P32942 547 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 EVCP57679 992 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 C9orf50Q5SZB4 431 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms