RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MYLIPQ8WY64 445 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 TMEM169Q96HH4 297 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 CHAMP1Q96JM3 812 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 ALG1Q9BT22 464 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 PDLIM7Q9NR12 457 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 ADGRE2Q9UHX3 823 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 COQ6Q9Y2Z9 468 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 C22orf46C9J442 243 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 JMJD7P0C870 316 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 TACR1P25103 407 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 AMPD3Q01432 767 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 FYB2Q5VWT5 728 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 ZC3H7AQ8IWR0 971 aaKnown RBP8.16□□□□□ -1.1
SF3B1-210ENST00000482158 LILRA2Q8N149 483 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 LZTR1Q8N653 840 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 ZFP64Q9NPA5 681 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 MAPRE3Q9UPY8 281 aa8.16□□□□□ -1.1
SF3B1-210ENST00000482158 GLRX3O76003 335 aaKnown RBP8.15□□□□□ -1.1
SF3B1-210ENST00000482158 SEPT7Q16181 437 aaKnown RBP8.15□□□□□ -1.1
SF3B1-210ENST00000482158 CDCA2Q69YH5 1023 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-210ENST00000482158 UBR7Q8N806 425 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 IGSF22Q8N9C0 903 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 TRMT2BQ96GJ1 504 aaKnown RBP8.15□□□□□ -1.1
SF3B1-210ENST00000482158 RNF32Q9H0A6 362 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 CAAP1Q9H8G2 361 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 GPR160Q9UJ42 338 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 CBLCQ9ULV8 474 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 COL4A3BPQ9Y5P4 624 aa8.15□□□□□ -1.1
SF3B1-210ENST00000482158 CCDC66A2RUB6 948 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-210ENST00000482158 FAM47E-STBD1D6RA91 191 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 GLI4P10075 376 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 PYGMP11217 842 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 PNLIPP16233 465 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 NCLP19338 710 aaKnown RBP8.14□□□□□ -1.11
SF3B1-210ENST00000482158 CYP4F8P98187 520 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 SNX17Q15036 470 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 HABP4Q5JVS0 413 aaKnown RBP8.14□□□□□ -1.11
SF3B1-210ENST00000482158 PIK3R6Q5UE93 754 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 PKN3Q6P5Z2 889 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 C16orf59Q7L2K0 433 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 OVCH1Q7RTY7 1134 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 RIOX2Q8IUF8 465 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 SIRT2Q8IXJ6 389 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 PPM1KQ8N3J5 372 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 CHAC2Q8WUX2 184 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 FBXW5Q969U6 566 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 KCNJ15Q99712 375 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 ORAI3Q9BRQ5 295 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 CELF4Q9BZC1 486 aaKnown RBP8.14□□□□□ -1.11
SF3B1-210ENST00000482158 BRINP2Q9C0B6 783 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 PCDH12Q9NPG4 1184 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 CRTAC1Q9NQ79 661 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 SAMD15Q9P1V8 674 aa8.14□□□□□ -1.11
SF3B1-210ENST00000482158 A0A1W2PQ27 194 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 A0A1W2PQ64 194 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 A0A1W2PQC6 194 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 A0A1W2PQD8 194 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 TCRBV5S4A2TA0A5A2 114 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 B4E1Z4 1266 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 KPNA6O60684 536 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 RAC2P15153 192 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 MECP2P51608 486 aaKnown RBP8.13□□□□□ -1.11
SF3B1-210ENST00000482158 NEK4P51957 841 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 CFAP100Q494V2 611 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 STRA8Q7Z7C7 330 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 ABHD4Q8TB40 342 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 TNFRSF12AQ9NP84 129 aa8.13□□□□□ -1.11
SF3B1-210ENST00000482158 TRAF5O00463 557 aa8.12□□□□□ -1.11
SF3B1-210ENST00000482158 NTRK1P04629 796 aa8.12□□□□□ -1.11
SF3B1-210ENST00000482158 DNM2P50570 870 aa8.12□□□□□ -1.11
SF3B1-210ENST00000482158 TMEM177Q53S58 311 aa8.12□□□□□ -1.11
SF3B1-210ENST00000482158 MROH9Q5TGP6 573 aa8.12□□□□□ -1.11
SF3B1-210ENST00000482158 USP33Q8TEY7 942 aa8.12□□□□□ -1.11
SF3B1-210ENST00000482158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.12□□□□□ -1.11
SF3B1-210ENST00000482158 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
SF3B1-210ENST00000482158 M0R2C6 588 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 CBX4O00257 560 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 NKRFO15226 690 aaKnown RBP eCLIP8.11□□□□□ -1.11
SF3B1-210ENST00000482158 NPTXRO95502 500 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 AMY2AP04746 511 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 COL6A2P12110 1019 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 AMY2BP19961 511 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 FLT3P36888 993 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 AFMP43652 599 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-210ENST00000482158 BICRALQ6AI39 1079 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 UBE2R2Q712K3 238 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-210ENST00000482158 OTOP3Q7RTS5 596 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 DDX53Q86TM3 631 aaKnown RBP8.11□□□□□ -1.11
SF3B1-210ENST00000482158 ANKLE2Q86XL3 938 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 AHI1Q8N157 1196 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 AFAP1L2Q8N4X5 818 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 SH3RF2Q8TEC5 729 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 LEO1Q8WVC0 666 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-210ENST00000482158 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 PUS7Q96PZ0 661 aaKnown RBP8.11□□□□□ -1.11
SF3B1-210ENST00000482158 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 EPB41L1Q9H4G0 881 aa8.11□□□□□ -1.11
SF3B1-210ENST00000482158 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms