RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 POP1Q99575 1024 aaKnown RBP17.65■□□□□ 0.42
HDAC6-224ENST00000481929 NAPBQ9H115 298 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 GTF2IRD1Q9UHL9 959 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 LGR5O75473 907 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 GH1P01241 217 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
HDAC6-224ENST00000481929 PTPN5P54829 565 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 RPS6P62753 249 aaKnown RBP17.64■□□□□ 0.41
HDAC6-224ENST00000481929 HTRA4P83105 476 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-224ENST00000481929 PTK7Q13308 1070 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 GPM6BQ13491 265 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 COL19A1Q14993 1142 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 TTBK2Q6IQ55 1244 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.64■□□□□ 0.41
HDAC6-224ENST00000481929 C7orf31Q8N865 590 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 KAT2BQ92831 832 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 LRRCC1Q9C099 1032 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 NSUN3Q9H649 340 aaKnown RBP17.64■□□□□ 0.41
HDAC6-224ENST00000481929 ECHDC1Q9NTX5 307 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 CLDND1Q9NY35 253 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 PNMA2Q9UL42 364 aa17.64■□□□□ 0.41
HDAC6-224ENST00000481929 H3BNC9 293 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 NMT2O60551 498 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 HERC4Q5GLZ8 1057 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-224ENST00000481929 ZNF618Q5T7W0 954 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 PRSS33Q8NF86 280 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 IL17RBQ9NRM6 502 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 MUTYHQ9UIF7 546 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 ZDBF2Q9HCK1 2354 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 EMSYQ7Z589 1322 aa17.63■□□□□ 0.41
HDAC6-224ENST00000481929 MICAL3Q7RTP6 2002 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 NCK2O43639 380 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 ARHGAP1Q07960 439 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 MBTPS1Q14703 1052 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 TRAF7Q6Q0C0 670 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 CHST3Q7LGC8 479 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 RPAINQ86UA6 219 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 YME1L1Q96TA2 773 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 ALG1Q9BT22 464 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 KATNAL1Q9BW62 490 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.62■□□□□ 0.41
HDAC6-224ENST00000481929 TECTAO75443 2155 aa17.62■□□□□ 0.41
HDAC6-224ENST00000481929 PSEN2P49810 448 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 SMAD2Q15796 467 aaKnown RBP17.61■□□□□ 0.41
HDAC6-224ENST00000481929 DGKDQ16760 1214 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 LY6KQ17RY6 165 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 TRIM71Q2Q1W2 868 aaKnown RBP17.61■□□□□ 0.41
HDAC6-224ENST00000481929 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 TMEM192Q8IY95 271 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 DBF4BQ8NFT6 615 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 PRRX2Q99811 253 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 GPCPD1Q9NPB8 672 aa17.61■□□□□ 0.41
HDAC6-224ENST00000481929 FRMPD2Q68DX3 1309 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-224ENST00000481929 MYO7AQ13402 2215 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-224ENST00000481929 MS4A1P11836 297 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-224ENST00000481929 MFSD10Q14728 455 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 SEPT14Q6ZU15 432 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 WNT8BQ93098 351 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 TRIOO75962 3097 aa17.6■□□□□ 0.41
HDAC6-224ENST00000481929 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
HDAC6-224ENST00000481929 CLUL1Q15846 466 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 PKN1Q16512 942 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 KIAA0753Q2KHM9 967 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 BMP8AQ7Z5Y6 402 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 RNF135Q8IUD6 432 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 EDAQ92838 391 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
HDAC6-224ENST00000481929 RBAK-RBAKDNI3L0D1 243 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 MBTPS2O43462 519 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 F2P00734 622 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 LTBRP36941 435 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 NOVP48745 357 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
HDAC6-224ENST00000481929 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.4
HDAC6-224ENST00000481929 DHX37Q8IY37 1157 aaKnown RBP17.58■□□□□ 0.4
HDAC6-224ENST00000481929 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
HDAC6-224ENST00000481929 CACNA1HO95180 2353 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 RSPH10B2B2RC85 870 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 HAS3O00219 553 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 RSPH10BP0C881 870 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 ZNF286BP0CG31 522 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
HDAC6-224ENST00000481929 ZNF200P98182 395 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-224ENST00000481929 IER5LQ5T953 404 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 TOP1MTQ969P6 601 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 PBXIP1Q96AQ6 731 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 INCENPQ9NQS7 918 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 COL4A6Q14031 1691 aa17.57■□□□□ 0.4
HDAC6-224ENST00000481929 ZFHX2Q9C0A1 2572 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms