RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 TTBK1Q5TCY1 1321 aaPredicted RBP3.58□□□□□ -1.84
USH2A-204ENST00000481786 CUL7Q14999 1698 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 STRCQ7RTU9 1775 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 A0A1W2PQH9 124 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 FANCAO15360 1455 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 FZD7O75084 574 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 TP53P04637 393 aaPredicted RBP3.57□□□□□ -1.84
USH2A-204ENST00000481786 ATF4P18848 351 aaPredicted RBP3.57□□□□□ -1.84
USH2A-204ENST00000481786 ERCC5P28715 1186 aaPredicted RBP3.57□□□□□ -1.84
USH2A-204ENST00000481786 BMP8BP34820 402 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 TARBP2Q15633 366 aaKnown RBP3.57□□□□□ -1.84
USH2A-204ENST00000481786 DCAF15Q66K64 600 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 TTC37Q6PGP7 1564 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 PREX1Q8TCU6 1659 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 SYT3Q9BQG1 590 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 WDR26Q9H7D7 661 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 RXFP1Q9HBX9 757 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 INVSQ9Y283 1065 aa3.57□□□□□ -1.84
USH2A-204ENST00000481786 CBFA2T2O43439 604 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 ZNF205O95201 554 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 GSNP06396 782 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 ASGR2P07307 311 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 DBHP09172 617 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 VAV1P15498 845 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 CD247P20963 164 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 RBM25P49756 843 aaKnown RBP3.56□□□□□ -1.84
USH2A-204ENST00000481786 CASP7P55210 303 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 ZNF445P59923 1031 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 PRR5P85299 388 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 ICAM4Q14773 271 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 CRTC3Q6UUV7 619 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 PALM2Q8IXS6 379 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 FAM169BQ8N8A8 192 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 CPLX3Q8WVH0 158 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 CDADC1Q9BWV3 514 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 GP6Q9HCN6 339 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 FAM86C1Q9NVL1 165 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 PODXL2Q9NZ53 605 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 STRIP2Q9ULQ0 834 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 PCDHB10Q9UN67 800 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 FAN1Q9Y2M0 1017 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 TSC22D4Q9Y3Q8 395 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 ZNF451Q9Y4E5 1061 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 SLC12A7Q9Y666 1083 aa3.56□□□□□ -1.84
USH2A-204ENST00000481786 ZCCHC11Q5TAX3 1644 aaKnown RBP3.55□□□□□ -1.84
USH2A-204ENST00000481786 NEO1Q92859 1461 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 NCOA1Q15788 1441 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 ZNF335Q9H4Z2 1342 aaPredicted RBP3.55□□□□□ -1.84
USH2A-204ENST00000481786 A0A087WZG4 1122 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 A0A1W2PQ45 241 aaPredicted RBP3.55□□□□□ -1.84
USH2A-204ENST00000481786 A0A1W2PQY0 241 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 SARSP49591 514 aaKnown RBP3.55□□□□□ -1.84
USH2A-204ENST00000481786 NR1I3Q14994 352 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 GNPTABQ3T906 1256 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 RTP2Q5QGT7 225 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 NOL9Q5SY16 702 aaKnown RBP3.55□□□□□ -1.84
USH2A-204ENST00000481786 KLHL6Q8WZ60 621 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 BRF1Q92994 677 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 HAUS7Q99871 368 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 DSCC1Q9BVC3 393 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 SLC12A9Q9BXP2 914 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 KLHL25Q9H0H3 589 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 PHAXQ9H814 394 aaKnown RBP3.55□□□□□ -1.84
USH2A-204ENST00000481786 IGSF5Q9NSI5 407 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 AP5S1Q9NUS5 200 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 C11orf21Q9P2W6 132 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 TNFRSF18Q9Y5U5 241 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 FHOD1Q9Y613 1164 aa3.55□□□□□ -1.84
USH2A-204ENST00000481786 ARHGEF40Q8TER5 1519 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 AKNAQ7Z591 1439 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 F8W031 263 aaPredicted RBP3.54□□□□□ -1.84
USH2A-204ENST00000481786 H0Y8X5 98 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 ITGA4P13612 1032 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 ENDOUP21128 410 aaKnown RBP3.54□□□□□ -1.84
USH2A-204ENST00000481786 SLC7A5Q01650 507 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 SMAD4Q13485 552 aaKnown RBP3.54□□□□□ -1.84
USH2A-204ENST00000481786 TCEAL1Q15170 157 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 PPP2R5EQ16537 467 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 FIBCD1Q8N539 461 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 ADAMTS17Q8TE56 1095 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 KISS1RQ969F8 398 aaPredicted RBP3.54□□□□□ -1.84
USH2A-204ENST00000481786 ANAPC16Q96DE5 110 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 TINF2Q9BSI4 451 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 CAPN10Q9HC96 672 aa3.54□□□□□ -1.84
USH2A-204ENST00000481786 ZNF536O15090 1300 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 EPHX1P07099 455 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 TACR1P25103 407 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 CWF19L1Q69YN2 538 aaKnown RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 HEATR6Q6AI08 1181 aaKnown RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 ZNF585AQ6P3V2 769 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 PAQR3Q6TCH7 311 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 B3GNT8Q7Z7M8 397 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 ZNF575Q86XF7 245 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 VPS37DQ86XT2 251 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 ZNF513Q8N8E2 541 aaPredicted RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 SMARCC2Q8TAQ2 1214 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 FCRL3Q96P31 734 aaPredicted RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 KLC2Q9H0B6 622 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 NOL6Q9H6R4 1146 aaKnown RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 CD248Q9HCU0 757 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms