RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 SLC43A3Q8NBI5 491 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 BRF1Q92994 677 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 TRIM43Q96BQ3 446 aaPredicted RBP15.04■□□□□ -0
HDAC1-207ENST00000481281 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 PRDM5Q9NQX1 630 aaPredicted RBP15.04■□□□□ -0
HDAC1-207ENST00000481281 POLR3EQ9NVU0 708 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 GRIN2DO15399 1336 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 DCDC2CA8MYV0 355 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 EVCP57679 992 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 PURAQ00577 322 aaKnown RBP15.03■□□□□ -0
HDAC1-207ENST00000481281 ARHGAP1Q07960 439 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 APOBRQ0VD83 1088 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 FAM126BQ8IXS8 530 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 LBHD1Q9BQE6 289 aaPredicted RBP15.03■□□□□ -0
HDAC1-207ENST00000481281 SEZ6LQ9BYH1 1024 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 TM6SF1Q9BZW5 370 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 UBE2OQ9C0C9 1292 aaKnown RBP15.03■□□□□ -0
HDAC1-207ENST00000481281 DDX41Q9UJV9 622 aaKnown RBP15.03■□□□□ -0
HDAC1-207ENST00000481281 TBX21Q9UL17 535 aa15.03■□□□□ -0
HDAC1-207ENST00000481281 MYH7BA7E2Y1 1941 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 SLC34A2O95436 690 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 GH1P01241 217 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 MYCLP12524 364 aaPredicted RBP15.02■□□□□ -0
HDAC1-207ENST00000481281 ITGB8P26012 769 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 CCND2P30279 289 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 METAP2P50579 478 aaKnown RBP eCLIP15.02■□□□□ -0
HDAC1-207ENST00000481281 ITGA7Q13683 1181 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 LY6KQ17RY6 165 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 BRDTQ58F21 947 aaPredicted RBP15.02■□□□□ -0
HDAC1-207ENST00000481281 WWC2Q6AWC2 1192 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 USP17L6PQ6QN14 398 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 RUFY3Q7L099 469 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 HEATR3Q7Z4Q2 680 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 SMARCC2Q8TAQ2 1214 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 GPKOWQ92917 476 aaPredicted RBP eCLIP15.02■□□□□ -0
HDAC1-207ENST00000481281 CUL5Q93034 780 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 EMID1Q96A84 441 aaPredicted RBP15.02■□□□□ -0
HDAC1-207ENST00000481281 PSTPIP2Q9H939 334 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 MRVI1Q9Y6F6 885 aa15.02■□□□□ -0
HDAC1-207ENST00000481281 CCDC196A0A1B0GTZ2 297 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 KPNA6O60684 536 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 STAM2O75886 525 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 CD4P01730 458 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 PSMC6P62333 389 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
HDAC1-207ENST00000481281 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 PPP1R18Q6NYC8 613 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 KCNV1Q6PIU1 500 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 TEX2Q8IWB9 1127 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 TDHQ8IZJ6 230 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-207ENST00000481281 INPP4AQ96PE3 977 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-207ENST00000481281 MTG1Q9BT17 334 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-207ENST00000481281 TMEM39AQ9NV64 488 aa15.01□□□□□ -0.01
HDAC1-207ENST00000481281 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
HDAC1-207ENST00000481281 MMP3P08254 477 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 MYL3P08590 195 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 TGFB3P10600 412 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 ADD1P35611 737 aaKnown RBP15□□□□□ -0.01
HDAC1-207ENST00000481281 TOB2Q14106 344 aaPredicted RBP15□□□□□ -0.01
HDAC1-207ENST00000481281 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 AFG1LQ8WV93 481 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 BADQ92934 168 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 NAP1L2Q9ULW6 460 aaPredicted RBP15□□□□□ -0.01
HDAC1-207ENST00000481281 CYP46A1Q9Y6A2 500 aa15□□□□□ -0.01
HDAC1-207ENST00000481281 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
HDAC1-207ENST00000481281 STXBP3O00186 592 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 RAG1P15918 1043 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 UBA1P22314 1058 aaKnown RBP14.99□□□□□ -0.01
HDAC1-207ENST00000481281 ICAM3P32942 547 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 GNPTABQ3T906 1256 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 XRRA1Q6P2D8 792 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 ZFP91Q96JP5 570 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-207ENST00000481281 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
HDAC1-207ENST00000481281 BARHL2Q9NY43 387 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 DOCK5Q9H7D0 1870 aa14.99□□□□□ -0.01
HDAC1-207ENST00000481281 B4GALT4O60513 344 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 TIMP1P01033 207 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 HOXD8P13378 290 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-207ENST00000481281 PDIA3P30101 505 aaKnown RBP14.98□□□□□ -0.01
HDAC1-207ENST00000481281 NAPAP54920 295 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 ANAPC15P60006 121 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 SP2Q02086 613 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 SEMA3FQ13275 785 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 LAMC2Q13753 1193 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 NTRK3Q16288 839 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 UBE2SQ16763 222 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 PFKFB3Q16875 520 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-207ENST00000481281 LRIT3Q3SXY7 679 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 CELF3Q5SZQ8 465 aaKnown RBP14.98□□□□□ -0.01
HDAC1-207ENST00000481281 MYSM1Q5VVJ2 828 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
HDAC1-207ENST00000481281 PPTC7Q8NI37 304 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 ALDH8A1Q9H2A2 487 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-207ENST00000481281 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
HDAC1-207ENST00000481281 SPATA31C2B4DYI2 1134 aa14.97□□□□□ -0.01
HDAC1-207ENST00000481281 SOX1O00570 391 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms