RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 DHX38Q92620 1227 aaKnown RBP11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 CTAGE1Q96RT6 745 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 NSUN3Q9H649 340 aaKnown RBP11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 INCENPQ9NQS7 918 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 TLR9Q9NR96 1032 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 CTNNA3Q9UI47 895 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
SMARCE1-210ENST00000481231 NMT2O60551 498 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 PLA2G6O60733 806 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 ALAS1P13196 640 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 SELPP16109 830 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 TKFCQ3LXA3 575 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 WDR11Q9BZH6 1224 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 VTA1Q9NP79 307 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 IL17RBQ9NRM6 502 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
SMARCE1-210ENST00000481231 ZFHX4Q86UP3 3567 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 PLXNA3P51805 1871 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 TSPY2A6NKD2 308 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 H3BNC9 293 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 STXBP3O00186 592 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 TBX10O75333 385 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 CSPG5O95196 566 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 CXCL10P02778 98 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 ID4P47928 161 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 ZXDAP98168 799 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 CTDSPL2Q05D32 466 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 GPM6BQ13491 265 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 PKN1Q16512 942 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 MYOCDQ8IZQ8 938 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 CAGE1Q8TC20 777 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 COPS5Q92905 334 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 CYP39A1Q9NYL5 469 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 INSL6Q9Y581 213 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 SCN10AQ9Y5Y9 1956 aa11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-210ENST00000481231 MX1P20591 662 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 GTF2F1P35269 517 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 PTPN11Q06124 597 aaPredicted RBP11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 HYAL1Q12794 435 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 SMAD4Q13485 552 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 IKBKEQ14164 716 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 CTC1Q2NKJ3 1217 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 VPS53Q5VIR6 699 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 NSMFQ6X4W1 530 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 SP7Q8TDD2 431 aaPredicted RBP11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 CCPG1Q9ULG6 757 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 MTMR7Q9Y216 660 aa11.12□□□□□ -0.63
SMARCE1-210ENST00000481231 SALL3Q9BXA9 1300 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 MED19A0JLT2 244 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 LINC01565O15544 149 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 ORC4O43929 436 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 KDM4AO75164 1064 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 ICAM1P05362 532 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 CKBP12277 381 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 AVPR2P30518 371 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 NOVP48745 357 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 HTRA4P83105 476 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 MBTPS1Q14703 1052 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 TTBK2Q6IQ55 1244 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 MORC4Q8TE76 937 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 DCAF4Q8WV16 495 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 ASIC4Q96FT7 647 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 VPS13AQ96RL7 3174 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 LCTP09848 1927 aa11.11□□□□□ -0.63
SMARCE1-210ENST00000481231 A6NJR5 290 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 NFIBO00712 420 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 EFCAB14O75071 495 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 PDGFBP01127 241 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 FGRP09769 529 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 SLC16A2P36021 539 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 BAATQ14032 418 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 PPP2R5BQ15173 497 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 TRAF7Q6Q0C0 670 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 WNT8BQ93098 351 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 RANBP17Q9H2T7 1088 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 IGFLR1Q9H665 355 aa11.1□□□□□ -0.63
SMARCE1-210ENST00000481231 CD207Q9UJ71 328 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms