RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 FCHSD1Q86WN1 690 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 CMTR1Q8N1G2 835 aaKnown RBP19.63■□□□□ 0.73
HSPG2-209ENST00000480900 JAKMIP1Q96N16 626 aaKnown RBP19.63■□□□□ 0.73
HSPG2-209ENST00000480900 MTG1Q9BT17 334 aaPredicted RBP19.63■□□□□ 0.73
HSPG2-209ENST00000480900 BRPF3Q9ULD4 1205 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 SNX14Q9Y5W7 946 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 PIK3CDO00329 1044 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 ZBTB43O43298 467 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 TIMP1P01033 207 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 MYL3P08590 195 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 MYCLP12524 364 aaPredicted RBP19.62■□□□□ 0.73
HSPG2-209ENST00000480900 CCND2P30279 289 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 PSMC6P62333 389 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 LY6KQ17RY6 165 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 KCNV1Q6PIU1 500 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 IL31RAQ8NI17 732 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 CUL5Q93034 780 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 DDX41Q9UJV9 622 aaKnown RBP19.62■□□□□ 0.73
HSPG2-209ENST00000480900 DOCK5Q9H7D0 1870 aa19.62■□□□□ 0.73
HSPG2-209ENST00000480900 CNTNAP5Q8WYK1 1306 aa19.61■□□□□ 0.73
HSPG2-209ENST00000480900 FGD1P98174 961 aa19.61■□□□□ 0.73
HSPG2-209ENST00000480900 ARHGAP1Q07960 439 aa19.61■□□□□ 0.73
HSPG2-209ENST00000480900 RTN1Q16799 776 aa19.61■□□□□ 0.73
HSPG2-209ENST00000480900 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
HSPG2-209ENST00000480900 EMID1Q96A84 441 aaPredicted RBP19.61■□□□□ 0.73
HSPG2-209ENST00000480900 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
HSPG2-209ENST00000480900 KLF18A0A0U1RQI7 1052 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 RGS20O76081 388 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 FPGSQ05932 587 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 GPR153Q6NV75 609 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 FBXL16Q8N461 479 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 CCDC82Q8N4S0 544 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 SMARCC2Q8TAQ2 1214 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 AFG1LQ8WV93 481 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 LRCH3Q96II8 777 aa19.6■□□□□ 0.73
HSPG2-209ENST00000480900 TRIP12Q14669 1992 aaPredicted RBP19.6■□□□□ 0.73
HSPG2-209ENST00000480900 GOLGA8AA7E2F4 631 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 GOLGA8BA8MQT2 603 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 MEIS2O14770 477 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 STAM2O75886 525 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 MMP3P08254 477 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 TGFB3P10600 412 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 CPA1P15085 419 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 PSMA5P28066 241 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 FUT2Q10981 343 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 MFSD5Q6N075 450 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 ALDH8A1Q9H2A2 487 aaPredicted RBP19.59■□□□□ 0.73
HSPG2-209ENST00000480900 PSTPIP2Q9H939 334 aa19.59■□□□□ 0.73
HSPG2-209ENST00000480900 hCG_1642624A0A1W2PR95 340 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 B4GALT4O60513 344 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 RPS6KB1P23443 525 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 LAMC2Q13753 1193 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 SHHQ15465 462 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 NFRKBQ6P4R8 1299 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 Q6ZUG5 572 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 TRPV6Q9H1D0 765 aa19.58■□□□□ 0.72
HSPG2-209ENST00000480900 DGKDQ16760 1214 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 NBPF20Q3BBV1 942 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 GNPTABQ3T906 1256 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 C9orf50Q5SZB4 431 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 PCNX4Q63HM2 1172 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 XRRA1Q6P2D8 792 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 HEATR3Q7Z4Q2 680 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 TEX2Q8IWB9 1127 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 DHX37Q8IY37 1157 aaKnown RBP19.57■□□□□ 0.72
HSPG2-209ENST00000480900 PPTC7Q8NI37 304 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 BRF1Q92994 677 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 INPP4AQ96PE3 977 aaPredicted RBP19.57■□□□□ 0.72
HSPG2-209ENST00000480900 USP26Q9BXU7 913 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 AGXT2Q9BYV1 514 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 FAM217BQ9NTX9 383 aaPredicted RBP19.57■□□□□ 0.72
HSPG2-209ENST00000480900 NID2Q14112 1375 aa19.57■□□□□ 0.72
HSPG2-209ENST00000480900 KAT6AQ92794 2004 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 CCDC196A0A1B0GTZ2 297 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 hCG_1984214I3L0E3 225 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 SUPT20HL2P0C7V6 817 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 HOXD8P13378 290 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 CASTP20810 708 aaKnown RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 METAP2P50579 478 aaKnown RBP eCLIP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 EPHB4P54760 987 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 MRPS9P82933 396 aaKnown RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 PTPN11Q06124 597 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 PPIGQ13427 754 aaKnown RBP eCLIP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 CELF3Q5SZQ8 465 aaKnown RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 MYSM1Q5VVJ2 828 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 WWC2Q6AWC2 1192 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 TMEM199Q8N511 208 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 ZNF713Q8N859 430 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 GPKOWQ92917 476 aaPredicted RBP eCLIP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 PPP1R12CQ9BZL4 782 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 HIPK3Q9H422 1215 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 NAP1L2Q9ULW6 460 aaPredicted RBP19.56■□□□□ 0.72
HSPG2-209ENST00000480900 TANC1Q9C0D5 1861 aa19.56■□□□□ 0.72
HSPG2-209ENST00000480900 CDC27P30260 824 aa19.55■□□□□ 0.72
HSPG2-209ENST00000480900 ICAM3P32942 547 aa19.55■□□□□ 0.72
HSPG2-209ENST00000480900 PPP1R18Q6NYC8 613 aa19.55■□□□□ 0.72
HSPG2-209ENST00000480900 NOC4LQ9BVI4 516 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms