RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 ADCK5Q3MIX3 580 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 TMTC3Q6ZXV5 915 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 MICU3Q86XE3 530 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 AFG1LQ8WV93 481 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 KCNB2Q92953 911 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 CUL5Q93034 780 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
TDP2-205ENST00000480495 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.37
TDP2-205ENST00000480495 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 STAM2O75886 525 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 REC8O95072 547 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 MMP3P08254 477 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 TGFB3P10600 412 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 EPHB4P54760 987 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.36
TDP2-205ENST00000480495 LAMC2Q13753 1193 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 NFRKBQ6P4R8 1299 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 HIPK3Q9H422 1215 aa17.33■□□□□ 0.36
TDP2-205ENST00000480495 RBM28Q9NW13 759 aaKnown RBP17.33■□□□□ 0.36
TDP2-205ENST00000480495 LAMA3Q16787 3333 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 PIK3CDO00329 1044 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 RGS20O76081 388 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
TDP2-205ENST00000480495 HSPA4P34932 840 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 DGKDQ16760 1214 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 NBPF20Q3BBV1 942 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 FAM109BQ6ICB4 259 aaPredicted RBP17.32■□□□□ 0.36
TDP2-205ENST00000480495 RAB11FIP4Q86YS3 637 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 DHX37Q8IY37 1157 aaKnown RBP17.32■□□□□ 0.36
TDP2-205ENST00000480495 CMTR1Q8N1G2 835 aaKnown RBP17.32■□□□□ 0.36
TDP2-205ENST00000480495 DEFB123Q8N688 67 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 IL31RAQ8NI17 732 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 SMARCC2Q8TAQ2 1214 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 RNPC3Q96LT9 517 aaKnown RBP17.32■□□□□ 0.36
TDP2-205ENST00000480495 NOC4LQ9BVI4 516 aaKnown RBP17.32■□□□□ 0.36
TDP2-205ENST00000480495 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
TDP2-205ENST00000480495 SZT2Q5T011 3432 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 ZBTB43O43298 467 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 CYP2C18P33260 490 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 RCAN1P53805 252 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 SMAD3P84022 425 aaKnown RBP17.31■□□□□ 0.36
TDP2-205ENST00000480495 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 FAM47CQ5HY64 1035 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 XRRA1Q6P2D8 792 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 PPTC7Q8NI37 304 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
TDP2-205ENST00000480495 MEIS2O14770 477 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
TDP2-205ENST00000480495 CSF2RAP15509 400 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 FGD1P98174 961 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 RTN1Q16799 776 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 CELF3Q5SZQ8 465 aaKnown RBP17.3■□□□□ 0.36
TDP2-205ENST00000480495 PSRC1Q6PGN9 363 aaPredicted RBP17.3■□□□□ 0.36
TDP2-205ENST00000480495 CCDC82Q8N4S0 544 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 PSTPIP2Q9H939 334 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 BRPF3Q9ULD4 1205 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 SNX14Q9Y5W7 946 aa17.3■□□□□ 0.36
TDP2-205ENST00000480495 KIAA1217Q5T5P2 1943 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 KLF18A0A0U1RQI7 1052 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 TMEM240Q5SV17 173 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 MYSM1Q5VVJ2 828 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 USP17L6PQ6QN14 398 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 TEX2Q8IWB9 1127 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 JAKMIP1Q96N16 626 aaKnown RBP17.29■□□□□ 0.36
TDP2-205ENST00000480495 INPP4AQ96PE3 977 aaPredicted RBP17.29■□□□□ 0.36
TDP2-205ENST00000480495 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■□□□ 14.4
TDP2-205ENST00000480495 KATNAL1Q9BW62 490 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 IL23AQ9NPF7 189 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 TRMT13Q9NUP7 481 aaKnown RBP17.29■□□□□ 0.36
TDP2-205ENST00000480495 SCN10AQ9Y5Y9 1956 aa17.29■□□□□ 0.36
TDP2-205ENST00000480495 CNTNAP5Q8WYK1 1306 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 GOLGA8AA7E2F4 631 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 GOLGA8BA8MQT2 603 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 PPFIA4O75335 1185 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 GGPS1O95749 300 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 HOXD8P13378 290 aaPredicted RBP17.28■□□□□ 0.36
TDP2-205ENST00000480495 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
TDP2-205ENST00000480495 ICAM3P32942 547 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
TDP2-205ENST00000480495 PCNX4Q63HM2 1172 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 BLOC1S2Q6QNY1 142 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 Q7L0L9 218 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 C16orf59Q7L2K0 433 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 HEATR3Q7Z4Q2 680 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 FBXL16Q8N461 479 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 KAT2BQ92831 832 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 MTMR10Q9NXD2 777 aa17.28■□□□□ 0.36
TDP2-205ENST00000480495 UMODL1Q5DID0 1318 aa17.27■□□□□ 0.36
TDP2-205ENST00000480495 SPATA31C2B4DYI2 1134 aa17.27■□□□□ 0.36
TDP2-205ENST00000480495 FIBPO43427 364 aa17.27■□□□□ 0.36
TDP2-205ENST00000480495 CYP2C9P11712 490 aa17.27■□□□□ 0.36
TDP2-205ENST00000480495 PSMA5P28066 241 aa17.27■□□□□ 0.36
TDP2-205ENST00000480495 CCL23P55773 120 aa17.27■□□□□ 0.36
TDP2-205ENST00000480495 CHMP4BP1P59074 171 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms