RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CSRNP2Q9H175 543 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 VWA3AA6NCI4 1184 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 CA12O43570 354 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 MARCH6O60337 910 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 CMA1P23946 247 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 CRHR2Q13324 411 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 SHC4Q6S5L8 630 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 C17orf99Q6UX52 265 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 ZNF579Q8NAF0 562 aaKnown RBP19.91■□□□□ 0.78
UPF3A-206ENST00000480362 DNERQ8NFT8 737 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 CYP2W1Q8TAV3 490 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 MXRA8Q9BRK3 442 aa19.91■□□□□ 0.78
UPF3A-206ENST00000480362 IGLV3-22A0A075B6J6 115 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 ALDH1A1P00352 501 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 PGK2P07205 417 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 NR3C2P08235 984 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 LIG1P18858 919 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 TXKP42681 527 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 MRPS9P82933 396 aaKnown RBP19.9■□□□□ 0.78
UPF3A-206ENST00000480362 HTRA3P83110 453 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 KLHL40Q2TBA0 621 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 CEP55Q53EZ4 464 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 SPECC1Q5M775 1068 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 XRRA1Q6P2D8 792 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 PLA2G4DQ86XP0 818 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 FAM133AQ8N9E0 248 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 FSIP1Q8NA03 581 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 HAS1Q92839 578 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 LENG9Q96B70 501 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 GOLPH3LQ9H4A5 285 aa19.9■□□□□ 0.78
UPF3A-206ENST00000480362 DNAJC25-GNG10A0A024R161 153 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 SOWAHBA6NEL2 793 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 MEIS1O00470 390 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 CCND2P30279 289 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 MAPK4P31152 587 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 VEGFBP49765 207 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 RESP18Q5W5W9 173 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 VSIG10LQ86VR7 867 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 MRPS27Q92552 414 aaKnown RBP19.89■□□□□ 0.77
UPF3A-206ENST00000480362 UIMC1Q96RL1 719 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 KCNMB3Q9NPA1 279 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 ADD3Q9UEY8 706 aaKnown RBP19.89■□□□□ 0.77
UPF3A-206ENST00000480362 UBIAD1Q9Y5Z9 338 aa19.89■□□□□ 0.77
UPF3A-206ENST00000480362 LCTP09848 1927 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 ASTN1O14525 1302 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 A0A1B0GVL5 298 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 TBX3O15119 743 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 STRNO43815 780 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 ITGB5P18084 799 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 LONP1P36776 959 aaKnown RBP19.88■□□□□ 0.77
UPF3A-206ENST00000480362 TECP42680 631 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 ALDH5A1P51649 535 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-206ENST00000480362 CCDC73Q6ZRK6 1079 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 GPR142Q7Z601 462 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 ABRAQ8N0Z2 381 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 GJA10Q969M2 543 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 IWS1Q96ST2 819 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 IVNS1ABPQ9Y6Y0 642 aa19.88■□□□□ 0.77
UPF3A-206ENST00000480362 MSH4O15457 936 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 ARP10275 920 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 MAP2K2P36507 400 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 NIPA1Q7RTP0 329 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 PLEKHH3Q7Z736 793 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 SLFN12Q8IYM2 578 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 ETNPPLQ8TBG4 499 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 FAM20AQ96MK3 541 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 TTC12Q9H892 705 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-206ENST00000480362 JADE2Q9NQC1 790 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 FAM13BQ9NYF5 915 aa19.87■□□□□ 0.77
UPF3A-206ENST00000480362 NR1I2O75469 434 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 PFKFB1P16118 471 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 ADORA2AP29274 412 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.77
UPF3A-206ENST00000480362 NDUFA8P51970 172 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-206ENST00000480362 USP49Q70CQ1 688 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 ENGASEQ8NFI3 743 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 EPSTI1Q96J88 318 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 WDR11Q9BZH6 1224 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 PCDHA12Q9UN75 941 aa19.86■□□□□ 0.77
UPF3A-206ENST00000480362 ZNFX1Q9P2E3 1918 aaKnown RBP19.86■□□□□ 0.77
UPF3A-206ENST00000480362 FAM237AA0A1B0GTK4 181 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 B4DLN1 442 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 ECM2O94769 699 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-206ENST00000480362 FAM160A1Q05DH4 1040 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 PDIA5Q14554 519 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 STXBP2Q15833 593 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 NLRX1Q86UT6 975 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 SYMPKQ92797 1274 aaKnown RBP19.85■□□□□ 0.77
UPF3A-206ENST00000480362 FGD4Q96M96 766 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 AK8Q96MA6 479 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 HPSEQ9Y251 543 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 PLXNB2O15031 1838 aa19.85■□□□□ 0.77
UPF3A-206ENST00000480362 SLC15A5A6NIM6 579 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 COBLO75128 1261 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 STAM2O75886 525 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 PDE4DQ08499 809 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 SNW1Q13573 536 aaKnown RBP19.84■□□□□ 0.77
UPF3A-206ENST00000480362 GRB14Q14449 540 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms