RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 FOXD4L4Q8WXT5 416 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 ZNF396Q96N95 335 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 INPP4AQ96PE3 977 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 POLR3EQ9NVU0 708 aa14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 UBIAD1Q9Y5Z9 338 aa14.27□□□□□ -0.13
TRAPPC12-218ENST00000479897 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 WNT7AO00755 349 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 NASPP49321 788 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 PRKCZQ05513 592 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 STXBP2Q15833 593 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 LETM2Q2VYF4 491 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 Q4G0T1 1027 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 CEP55Q53EZ4 464 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 CLEC17AQ6ZS10 378 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 TRMT44Q8IYL2 757 aaKnown RBP14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 LENG9Q96B70 501 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 GPRASP2Q96D09 838 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 TINF2Q9BSI4 451 aa14.26□□□□□ -0.13
TRAPPC12-218ENST00000479897 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 MEIS1O00470 390 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 TDP2O95551 362 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 FAM86B2P0C5J1 330 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 FLT3LGP49771 235 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 UBXN2AP68543 259 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 PDE4DQ08499 809 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 USP28Q96RU2 1077 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 MXRA8Q9BRK3 442 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 TSKSQ9UJT2 592 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 GABRQQ9UN88 632 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 PCDHB6Q9Y5E3 794 aa14.25□□□□□ -0.13
TRAPPC12-218ENST00000479897 LAD1O00515 517 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 TBX3O15119 743 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 FOXN1O15353 648 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 MAFGO15525 162 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 CCNT1O60563 726 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 RGS20O76081 388 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 YEATS4O95619 227 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 HSPA1AP0DMV8 641 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 HSPA1BP0DMV9 641 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 ITGB5P18084 799 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 ICAM3P32942 547 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 KRT85P78386 507 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 ATP2C1P98194 919 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 DNM1Q05193 864 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 ANO1Q5XXA6 986 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 CDHR1Q96JP9 859 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 KATNBL1Q9H079 304 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 VTA1Q9NP79 307 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 KCNMB3Q9NPA1 279 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 JADE2Q9NQC1 790 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 DDX25Q9UHL0 483 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 CEP131Q9UPN4 1083 aa14.24□□□□□ -0.13
TRAPPC12-218ENST00000479897 SLC37A4O43826 429 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 NEMFO60524 1076 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 SNAI1O95863 264 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 MYCLP12524 364 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 CYP2B6P20813 491 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 PRPHP41219 470 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 CTCFP49711 727 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 NBR1Q14596 966 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 PTPAQ15257 358 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 SF3A1Q15459 793 aaKnown RBP14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 OTOP1Q7RTM1 612 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 ETNPPLQ8TBG4 499 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 PXYLP1Q8TE99 480 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 ABHD16BQ9H3Z7 469 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 FLRT1Q9NZU1 646 aa14.23□□□□□ -0.13
TRAPPC12-218ENST00000479897 RBM47A0AV96 593 aaKnown RBP14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 FIBPO43427 364 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 ECM2O94769 699 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 MCM7P33993 719 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 ZNF76P36508 570 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 MTMR1Q13613 665 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 CCL14Q16627 93 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 PRR16Q569H4 304 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 ARL6IP4Q66PJ3 421 aaKnown RBP14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 KCNV1Q6PIU1 500 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 PLA2G4DQ86XP0 818 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 C4orf32Q8N8J7 132 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 LINC00301Q8NCQ3 95 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 TRIB2Q92519 343 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 MTMR9Q96QG7 549 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 SCAND2PQ9GZW5 306 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms