RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 STK17AQ9UEE5 414 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 ERCC5P28715 1186 aaPredicted RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 MUM1L1Q5H9M0 696 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 SH3D19Q5HYK7 790 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 SMYD4Q8IYR2 804 aaPredicted RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 BLOC1S4Q9NUP1 217 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 TTLL12Q14166 644 aaPredicted RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 DHX8Q14562 1220 aaKnown RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 DRC7Q8IY82 874 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 ENOX1Q8TC92 643 aaKnown RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 LARP4BQ92615 738 aaKnown RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 HSD3B7Q9H2F3 369 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
CLDN18-203ENST00000479660 COL20A1Q9P218 1284 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 ADAMTS5Q9UNA0 930 aa16.19■□□□□ 0.18
CLDN18-203ENST00000479660 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
CLDN18-203ENST00000479660 CCT6AP40227 531 aaKnown RBP16.18■□□□□ 0.18
CLDN18-203ENST00000479660 STAT3P40763 770 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 GHRHRQ02643 423 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 ECM1Q16610 540 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 TMEM119Q4V9L6 283 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
CLDN18-203ENST00000479660 KLHL10Q6JEL2 608 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 MRFAP1L1Q96HT8 127 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 C7orf25Q9BPX7 421 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 TRIM9Q9C026 710 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 FANCLQ9NW38 375 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 RABGAP1Q9Y3P9 1069 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 KDM3AQ9Y4C1 1321 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 PPP1R3GB7ZBB8 358 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 OAZ1P54368 228 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
CLDN18-203ENST00000479660 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 MCM6Q14566 821 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 KCNB1Q14721 858 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 KMT5BQ4FZB7 885 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 TRMT44Q8IYL2 757 aaKnown RBP16.18■□□□□ 0.18
CLDN18-203ENST00000479660 ANKRD13AQ8IZ07 590 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 SAMD3Q8N6K7 520 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 RAD54LQ92698 747 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 ELP3Q9H9T3 547 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 RIPK3Q9Y572 518 aa16.18■□□□□ 0.18
CLDN18-203ENST00000479660 PARP14Q460N5 1801 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 POTECB2RU33 542 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 KLRC4O43908 158 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 HYIQ5T013 277 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 SNRNP48Q6IEG0 339 aaKnown RBP16.17■□□□□ 0.18
CLDN18-203ENST00000479660 MOB2Q70IA6 237 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
CLDN18-203ENST00000479660 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
CLDN18-203ENST00000479660 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
CLDN18-203ENST00000479660 RLFQ13129 1914 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ESPNB1AK53 854 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 SLC26A4O43511 780 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ATP1A3P13637 1013 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 CDC25BP30305 580 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ASIC1P78348 528 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 PPATQ06203 517 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 SEMA3FQ13275 785 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 TMEM132BQ14DG7 1078 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 NCAPH2Q6IBW4 605 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 RNF207Q6ZRF8 634 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 KCNK18Q7Z418 384 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ERMNQ8TAM6 284 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 CCDC47Q96A33 483 aaKnown RBP16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
CLDN18-203ENST00000479660 CLMNQ96JQ2 1002 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 MED15Q96RN5 788 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 RNF146Q9NTX7 359 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ZNF214Q9UL59 606 aaPredicted RBP16.16■□□□□ 0.18
CLDN18-203ENST00000479660 KIAA1024Q9UPX6 916 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 SCN4AP35499 1836 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
CLDN18-203ENST00000479660 MEIS1O00470 390 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 IRF6O14896 467 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 RHOBTB3O94955 611 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 NSMFQ6X4W1 530 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 ZSCAN30Q86W11 494 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 OTUD5Q96G74 571 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 VAV3Q9UKW4 847 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 GDAQ9Y2T3 454 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 STK24Q9Y6E0 443 aa16.16■□□□□ 0.18
CLDN18-203ENST00000479660 MYPNQ86TC9 1320 aa16.15■□□□□ 0.18
CLDN18-203ENST00000479660 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
CLDN18-203ENST00000479660 STX17P56962 302 aa16.15■□□□□ 0.18
CLDN18-203ENST00000479660 FANCCQ00597 558 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms