RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 CDC27P30260 824 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 CPT1AP50416 773 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
SP140-210ENST00000479539 EVCP57679 992 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 FGD1P98174 961 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 FAAP100Q0VG06 881 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 PGM5Q15124 567 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 FCHSD1Q86WN1 690 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 BRF1Q92994 677 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 PSTPIP2Q9H939 334 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
SP140-210ENST00000479539 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 GOLGA8BA8MQT2 603 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 KPNA6O60684 536 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 GH1P01241 217 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 MYCLP12524 364 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 CCND2P30279 289 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 ADD1P35611 737 aaKnown RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 ITGA7Q13683 1181 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 USP17L6PQ6QN14 398 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 CUL5Q93034 780 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 LBHD1Q9BQE6 289 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 TMEM39AQ9NV64 488 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
SP140-210ENST00000479539 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
SP140-210ENST00000479539 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 STAM2O75886 525 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 CD4P01730 458 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 TGFB3P10600 412 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 ITGB8P26012 769 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
SP140-210ENST00000479539 XRRA1Q6P2D8 792 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 MTG1Q9BT17 334 aaPredicted RBP12.13□□□□□ -0.47
SP140-210ENST00000479539 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
SP140-210ENST00000479539 hCG_1984214I3L0E3 225 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 MYL3P08590 195 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 ICAM3P32942 547 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 PSMC6P62333 389 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
SP140-210ENST00000479539 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 HEATR3Q7Z4Q2 680 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 TDHQ8IZJ6 230 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 ZNF713Q8N859 430 aaPredicted RBP12.12□□□□□ -0.47
SP140-210ENST00000479539 AFG1LQ8WV93 481 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
SP140-210ENST00000479539 BADQ92934 168 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 INPP4AQ96PE3 977 aaPredicted RBP12.12□□□□□ -0.47
SP140-210ENST00000479539 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
SP140-210ENST00000479539 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 NID2Q14112 1375 aa12.12□□□□□ -0.47
SP140-210ENST00000479539 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
SP140-210ENST00000479539 SPATA31C2B4DYI2 1134 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 TIMP1P01033 207 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 MMP3P08254 477 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 HOXD8P13378 290 aaPredicted RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 RAG1P15918 1043 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 SP2Q02086 613 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 LRIT3Q3SXY7 679 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 CELF3Q5SZQ8 465 aaKnown RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 PCNX4Q63HM2 1172 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
SP140-210ENST00000479539 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
SP140-210ENST00000479539 LCTP09848 1927 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms