RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 PDGFRBP09619 1106 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 POU3F3P20264 500 aaPredicted RBP5.01□□□□□ -1.61
NF1-209ENST00000479536 SOX5P35711 763 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 NCKAP1LP55160 1127 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 UBXN11Q5T124 520 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 POMZP3Q6PJE2 187 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 RNF111Q6ZNA4 994 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 JAMLQ86YT9 394 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 TRIM59Q8IWR1 403 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 ARHGEF39Q8N4T4 335 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 CRACR2BQ8N4Y2 399 aaPredicted RBP5.01□□□□□ -1.61
NF1-209ENST00000479536 PLCD4Q9BRC7 762 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 IER2Q9BTL4 223 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 ASPNQ9BXN1 380 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 FAM126AQ9BYI3 521 aaPredicted RBP5.01□□□□□ -1.61
NF1-209ENST00000479536 FOXP3Q9BZS1 431 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 ASCC2Q9H1I8 757 aaPredicted RBP5.01□□□□□ -1.61
NF1-209ENST00000479536 CGGBP1Q9UFW8 167 aaPredicted RBP5.01□□□□□ -1.61
NF1-209ENST00000479536 FBXL21Q9UKT6 434 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 ATP8A1Q9Y2Q0 1164 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 PCDHB12Q9Y5F1 795 aa5.01□□□□□ -1.61
NF1-209ENST00000479536 A0A087WZG4 1122 aa5□□□□□ -1.61
NF1-209ENST00000479536 SSU72P8A0A1W2PR75 194 aa5□□□□□ -1.61
NF1-209ENST00000479536 BUB1BO60566 1050 aaPredicted RBP5□□□□□ -1.61
NF1-209ENST00000479536 KCNH1O95259 989 aa5□□□□□ -1.61
NF1-209ENST00000479536 S100BP04271 92 aaPredicted RBP5□□□□□ -1.61
NF1-209ENST00000479536 SDSP20132 328 aa5□□□□□ -1.61
NF1-209ENST00000479536 CDKN1CP49918 316 aaPredicted RBP5□□□□□ -1.61
NF1-209ENST00000479536 SLURP1P55000 103 aa5□□□□□ -1.61
NF1-209ENST00000479536 ZNF445P59923 1031 aa5□□□□□ -1.61
NF1-209ENST00000479536 ERVFRD-1P60508 538 aa5□□□□□ -1.61
NF1-209ENST00000479536 NBPF9Q3BBW0 867 aa5□□□□□ -1.61
NF1-209ENST00000479536 CT47A1Q5JQC4 288 aaPredicted RBP5□□□□□ -1.61
NF1-209ENST00000479536 NOL9Q5SY16 702 aaKnown RBP5□□□□□ -1.61
NF1-209ENST00000479536 RNF180Q86T96 592 aa5□□□□□ -1.61
NF1-209ENST00000479536 FERMT3Q86UX7 667 aa5□□□□□ -1.61
NF1-209ENST00000479536 LRRTM3Q86VH5 581 aa5□□□□□ -1.61
NF1-209ENST00000479536 UBR7Q8N806 425 aa5□□□□□ -1.61
NF1-209ENST00000479536 PRPF38AQ8NAV1 312 aaKnown RBP5□□□□□ -1.61
NF1-209ENST00000479536 BTN2A2Q8WVV5 523 aa5□□□□□ -1.61
NF1-209ENST00000479536 BRF1Q92994 677 aa5□□□□□ -1.61
NF1-209ENST00000479536 HHIPL1Q96JK4 782 aa5□□□□□ -1.61
NF1-209ENST00000479536 TARS2Q9BW92 718 aaKnown RBP5□□□□□ -1.61
NF1-209ENST00000479536 HOMER2Q9NSB8 354 aa5□□□□□ -1.61
NF1-209ENST00000479536 INTS7Q9NVH2 962 aaKnown RBP5□□□□□ -1.61
NF1-209ENST00000479536 KLHL14Q9P2G3 628 aa5□□□□□ -1.61
NF1-209ENST00000479536 MAGEC2Q9UBF1 373 aaPredicted RBP5□□□□□ -1.61
NF1-209ENST00000479536 SFMBT1Q9UHJ3 866 aa5□□□□□ -1.61
NF1-209ENST00000479536 MAPRE3Q9UPY8 281 aa5□□□□□ -1.61
NF1-209ENST00000479536 FHOD1Q9Y613 1164 aa5□□□□□ -1.61
NF1-209ENST00000479536 FFAR3O14843 346 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 DLX3O60479 287 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 C6orf222P0C671 652 aaPredicted RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 EVA1CP58658 441 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 NMIQ13287 307 aaPredicted RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 SNW1Q13573 536 aaKnown RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 KIR3DS1Q14943 382 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 RAB3GAP1Q15042 981 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 TRIM61Q5EBN2 209 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 GTF2IRD2BQ6EKJ0 949 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 CNNM4Q6P4Q7 775 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 NOL8Q76FK4 1167 aaKnown RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 GTF2IRD2Q86UP8 949 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 DDX42Q86XP3 938 aaKnown RBP eCLIP4.99□□□□□ -1.61
NF1-209ENST00000479536 USHBP1Q8N6Y0 703 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 SYTL5Q8TDW5 730 aaPredicted RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 PRDM14Q9GZV8 571 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 NOL6Q9H6R4 1146 aaKnown RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 USP40Q9NVE5 1235 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 MINPP1Q9UNW1 487 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 DIS3Q9Y2L1 958 aaKnown RBP4.99□□□□□ -1.61
NF1-209ENST00000479536 PCDHA5Q9Y5H7 936 aa4.99□□□□□ -1.61
NF1-209ENST00000479536 NUDT19A8MXV4 375 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 FKTNO75072 461 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 DNAJC8O75937 253 aaPredicted RBP4.98□□□□□ -1.61
NF1-209ENST00000479536 PARNO95453 639 aaKnown RBP4.98□□□□□ -1.61
NF1-209ENST00000479536 TNFRSF1AP19438 455 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 RTP1P59025 263 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 GABREP78334 506 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 KRTAP1-1Q07627 177 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 TMEM62Q0P6H9 643 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 PPP2R5DQ14738 602 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 SF1Q15637 639 aaKnown RBP4.98□□□□□ -1.61
NF1-209ENST00000479536 ZFYVE27Q5T4F4 411 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 ZPBP2Q6X784 338 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 FIBCD1Q8N539 461 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 SLC7A14Q8TBB6 771 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 KCTD13Q8WZ19 329 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 SLC52A2Q9HAB3 445 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 TRIM39Q9HCM9 518 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 GFOD1Q9NXC2 390 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 PRR13Q9NZ81 148 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 SRRDQ9UH36 339 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 NDOR1Q9UHB4 597 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 CNOT11Q9UKZ1 510 aaKnown RBP4.98□□□□□ -1.61
NF1-209ENST00000479536 TCFL5Q9UL49 500 aa4.98□□□□□ -1.61
NF1-209ENST00000479536 G3BP2Q9UN86 482 aaKnown RBP4.98□□□□□ -1.61
NF1-209ENST00000479536 TMEM82A0PJX8 343 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 BLACEA4D250 179 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 OVOL3O00110 214 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms