RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 RANBP17Q9H2T7 1088 aaKnown RBP7.81□□□□□ -1.16
VCP-205ENST00000479300 UBE2ZQ9H832 354 aaPredicted RBP7.81□□□□□ -1.16
VCP-205ENST00000479300 POLR3EQ9NVU0 708 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 MTUS1Q9ULD2 1270 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 CCPG1Q9ULG6 757 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 SIP14410 1827 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 ZNF318Q5VUA4 2279 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 LINC01553A4QN01 128 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 HIP1O00291 1037 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 ICAM1P05362 532 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 ACTN1P12814 892 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 IL9P15248 144 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 EDNRBP24530 442 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 SLC16A2P36021 539 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 ERVK-21P61565 698 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 MBTPS1Q14703 1052 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 LEXMQ3ZCV2 418 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 MCMDC2Q4G0Z9 681 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 GDF6Q6KF10 455 aaPredicted RBP7.8□□□□□ -1.16
VCP-205ENST00000479300 NFRKBQ6P4R8 1299 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 KAT2BQ92831 832 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 MFRPQ9BY79 579 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 FTOQ9C0B1 505 aaKnown RBP eCLIP7.8□□□□□ -1.16
VCP-205ENST00000479300 DIAPH3Q9NSV4 1193 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 STX8Q9UNK0 236 aa7.8□□□□□ -1.16
VCP-205ENST00000479300 C5orf42Q9H799 3197 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 PRR33A8MZF0 331 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
VCP-205ENST00000479300 BAIAP3O94812 1187 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 GJB5O95377 273 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 CXCL10P02778 98 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 KCNA5P22460 613 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 MRE11P49959 708 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 CPT1AP50416 773 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 NHLH1Q02575 133 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 CTDSPL2Q05D32 466 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 RBL2Q08999 1139 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 HIC1Q14526 733 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 CCDC96Q2M329 555 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 TRIM71Q2Q1W2 868 aaKnown RBP7.79□□□□□ -1.16
VCP-205ENST00000479300 RRP12Q5JTH9 1297 aaKnown RBP7.79□□□□□ -1.16
VCP-205ENST00000479300 CCDC62Q6P9F0 684 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 BTNL9Q6UXG8 535 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 CHD1LQ86WJ1 897 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 GJD3Q8N144 294 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 RETREG2Q8NC44 543 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 C17orf80Q9BSJ5 609 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 RNF41Q9H4P4 317 aaPredicted RBP7.79□□□□□ -1.16
VCP-205ENST00000479300 LMCD1Q9NZU5 365 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 MTMR7Q9Y216 660 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 ATG2AQ2TAZ0 1938 aa7.79□□□□□ -1.16
VCP-205ENST00000479300 POTEB3A0JP26 581 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 GRXCR2A6NFK2 248 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 KIF28PB7ZC32 967 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 PCP11498 1178 aaKnown RBP7.78□□□□□ -1.16
VCP-205ENST00000479300 SELPP16109 830 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 CALML3P27482 149 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 RPS6P62753 249 aaKnown RBP7.78□□□□□ -1.16
VCP-205ENST00000479300 PTPN11Q06124 597 aaPredicted RBP7.78□□□□□ -1.16
VCP-205ENST00000479300 ARHGAP1Q07960 439 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 NMIQ13287 307 aaPredicted RBP7.78□□□□□ -1.16
VCP-205ENST00000479300 PDAP1Q13442 181 aaKnown RBP7.78□□□□□ -1.16
VCP-205ENST00000479300 BFSP2Q13515 415 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 PPP2R5BQ15173 497 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 ALX1Q15699 326 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 PTGISQ16647 500 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 POTEBQ6S5H4 581 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 MFSD6Q6ZSS7 791 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 LRRC8DQ7L1W4 858 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 NEK9Q8TD19 979 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 AFAP1L1Q8TED9 768 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 AFG1LQ8WV93 481 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 FBXL18Q96ME1 805 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 BACH2Q9BYV9 841 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 ANAPC4Q9UJX5 808 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 FRMPD2Q68DX3 1309 aaPredicted RBP7.78□□□□□ -1.16
VCP-205ENST00000479300 CCDC171Q6TFL3 1326 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 SALL3Q9BXA9 1300 aa7.78□□□□□ -1.16
VCP-205ENST00000479300 LOC102724159A0A0B4J2E5 919 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 PTPDC1A2A3K4 754 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 H3BQ06 376 aaPredicted RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 ZNF213O14771 459 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 ORC4O43929 436 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 PPP1R37O75864 691 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 MMP3P08254 477 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 TXNP10599 105 aaKnown RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 CKBP12277 381 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 SDSP20132 328 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 PDE4AP27815 886 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 KCNJ6P48051 423 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 PSEN1P49768 467 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 NT5C2P49902 561 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 CHMP4BP1P59074 171 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 ZNF200P98182 395 aaPredicted RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 NUCB1Q02818 461 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 COL19A1Q14993 1142 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms