RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-210	ENST00000479295	TXN	P10599	105 aa	Known RBP	11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	TGFB3	P10600	412 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	HOXD8	P13378	290 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	SCG2	P13521	617 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	PTGS1	P23219	599 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	RBM25	P49756	843 aa	Known RBP	11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	ARHGAP1	Q07960	439 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	GNAS	Q5JWF2	1037 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	PCNX4	Q63HM2	1172 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	KCNV1	Q6PIU1	500 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	FAM177A1	Q8N128	213 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	CRYGN	Q8WXF5	182 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	ZMYND12	Q9H0C1	365 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	GLT8D2	Q9H1C3	349 aa		11.19	□□□□□ -0.62
PTPN18-210	ENST00000479295	GRIN2D	O15399	1336 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	CCND2	P30279	289 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	CPT1A	P50416	773 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	RTP1	P59025	263 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	BEX3	Q00994	111 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	SEMA3F	Q13275	785 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	ANKRD1	Q15327	319 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	HEATR3	Q7Z4Q2	680 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	FCHSD1	Q86WN1	690 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	SMARCC2	Q8TAQ2	1214 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	COPS5	Q92905	334 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	CUL5	Q93034	780 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	FERMT2	Q96AC1	680 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	GLT1D1	Q96MS3	346 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	GDF15	Q99988	308 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	AP5M1	Q9H0R1	490 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	STARD7	Q9NQZ5	370 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295	TPCN1	Q9ULQ1	816 aa		11.18	□□□□□ -0.62
PTPN18-210	ENST00000479295		A0A0U1RQG5	324 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SMCO2	A6NFE2	343 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SPATA31C2	B4DYI2	1134 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	ARVCF	O00192	962 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	ZEB2	O60315	1214 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	KPNA6	O60684	536 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	FOS	P01100	380 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	GH1	P01241	217 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	BMP8B	P34820	402 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	ATN1	P54259	1190 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	AK2	P54819	239 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	NAPA	P54920	295 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	CCT2	P78371	535 aa	Known RBP	11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	PURA	Q00577	322 aa	Known RBP	11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SP2	Q02086	613 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SCRN1	Q12765	414 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	AP3B2	Q13367	1082 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	TRIM60	Q495X7	471 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	MYSM1	Q5VVJ2	828 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SEPT14	Q6ZU15	432 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	C7orf61	Q8IZ16	206 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	IL27	Q8NEV9	243 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	OR6J1	Q8NGC5	347 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SENP7	Q9BQF6	1050 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	NCOA5	Q9HCD5	579 aa	Known RBP	11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SH3GLB2	Q9NR46	395 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	POLR3E	Q9NVU0	708 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	PCDHA6	Q9UN73	950 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	PCDHA8	Q9Y5H6	950 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	UBIAD1	Q9Y5Z9	338 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	SCN10A	Q9Y5Y9	1956 aa		11.17	□□□□□ -0.62
PTPN18-210	ENST00000479295	STK36	Q9NRP7	1315 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	KIAA0355	O15063	1070 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	MAFG	O15525	162 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	CD4	P01730	458 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	MYCL	P12524	364 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	ITGB5	P18084	799 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	ADCY7	P51828	1080 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	TLE2	Q04725	743 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	LAMC2	Q13753	1193 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	UBE2S	Q16763	222 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	LY6K	Q17RY6	165 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	CELF3	Q5SZQ8	465 aa	Known RBP	11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	MCTP2	Q6DN12	878 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	CXCL17	Q6UXB2	119 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	FAM126B	Q8IXS8	530 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	PHKB	Q93100	1093 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	GPRASP2	Q96D09	838 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	PDLIM7	Q9NR12	457 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	MRVI1	Q9Y6F6	885 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	LTBP2	Q14767	1821 aa		11.16	□□□□□ -0.62
PTPN18-210	ENST00000479295	MROH7	Q68CQ1	1323 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295		A0A1W2PPC1	479 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	SPDYE3	A6NKU9	549 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295		M0R2N6	131 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	ADAMTS3	O15072	1205 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	FIBP	O43427	364 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	DEXI	O95424	95 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	CTDNEP1	O95476	244 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	MMP3	P08254	477 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	CYP3A4	P08684	503 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	UBA1	P22314	1058 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	SREBF1	P36956	1147 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	PTPN11	Q06124	597 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	FAAP100	Q0VG06	881 aa		11.15	□□□□□ -0.62
PTPN18-210	ENST00000479295	NPY5R	Q15761	445 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms