RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MTRQ99707 1265 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 DDX58O95786 925 aaKnown RBP23.34■■□□□ 1.33
SDF4-206ENST00000478938 SCNN1BP51168 640 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 KIF11P52732 1056 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 PIGWQ7Z7B1 504 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 PSMD1Q99460 953 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 FOXP1Q9H334 677 aaPredicted RBP23.34■■□□□ 1.33
SDF4-206ENST00000478938 ARHGAP20Q9P2F6 1191 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 WDR19Q8NEZ3 1342 aa23.33■■□□□ 1.33
SDF4-206ENST00000478938 H7C1D1 291 aa23.33■■□□□ 1.33
SDF4-206ENST00000478938 NPTXRO95502 500 aa23.33■■□□□ 1.33
SDF4-206ENST00000478938 IMPDH2P12268 514 aa23.33■■□□□ 1.33
SDF4-206ENST00000478938 MYD88Q99836 296 aa23.33■■□□□ 1.33
SDF4-206ENST00000478938 A2ML1A8K2U0 1454 aa23.33■■□□□ 1.33
SDF4-206ENST00000478938 ZSCAN9O15535 394 aaPredicted RBP23.33■■□□□ 1.32
SDF4-206ENST00000478938 MMEP08473 750 aa23.33■■□□□ 1.32
SDF4-206ENST00000478938 DNM2P50570 870 aa23.33■■□□□ 1.32
SDF4-206ENST00000478938 FKBP4Q02790 459 aaKnown RBP eCLIP23.33■■□□□ 1.322e-7■■■■□ 25.9
SDF4-206ENST00000478938 TMC4Q7Z404 712 aa23.33■■□□□ 1.32
SDF4-206ENST00000478938 ATL2Q8NHH9 583 aa23.33■■□□□ 1.32
SDF4-206ENST00000478938 EXOC1Q9NV70 894 aa23.33■■□□□ 1.32
SDF4-206ENST00000478938 PNMA2Q9UL42 364 aa23.33■■□□□ 1.32
SDF4-206ENST00000478938 B4E1Z4 1266 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 FMNL1O95466 1100 aaPredicted RBP23.32■■□□□ 1.32
SDF4-206ENST00000478938 EIF4A3P38919 411 aaKnown RBP23.32■■□□□ 1.32
SDF4-206ENST00000478938 CCNG1P51959 295 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 POLE2P56282 527 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 HLFQ16534 295 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 ZNF658Q5TYW1 1059 aaPredicted RBP23.32■■□□□ 1.32
SDF4-206ENST00000478938 CMTR1Q8N1G2 835 aaKnown RBP23.32■■□□□ 1.32
SDF4-206ENST00000478938 LPIN2Q92539 896 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 ANKIB1Q9P2G1 1089 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 C2CD5Q86YS7 1000 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 KLHL29Q96CT2 875 aa23.32■■□□□ 1.32
SDF4-206ENST00000478938 WNT7AO00755 349 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 ASAP2O43150 1006 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 SHBGP04278 402 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 CHN1P15882 459 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 CNGA1P29973 690 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 SLC39A6Q13433 755 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 RNF220Q5VTB9 566 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 LRRC45Q96CN5 670 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 UBE2OQ9C0C9 1292 aaKnown RBP23.31■■□□□ 1.32
SDF4-206ENST00000478938 PUS7LQ9H0K6 701 aaKnown RBP23.31■■□□□ 1.32
SDF4-206ENST00000478938 ISCUQ9H1K1 167 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 SAMD15Q9P1V8 674 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 ZMYND8Q9ULU4 1186 aaPredicted RBP23.31■■□□□ 1.32
SDF4-206ENST00000478938 PACSIN2Q9UNF0 486 aaPredicted RBP23.31■■□□□ 1.32
SDF4-206ENST00000478938 TRIM33Q9UPN9 1127 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 MYH7BA7E2Y1 1941 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 FTCDO95954 541 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 PCK1P35558 622 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 MSH2P43246 934 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 MTA1Q13330 715 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 PLEKHG4BQ96PX9 1271 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 RPS6KC1Q96S38 1066 aa23.31■■□□□ 1.32
SDF4-206ENST00000478938 TRIM75PA6NK02 468 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 MAGEA8P43361 318 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 NKX1-2Q9UD57 310 aaPredicted RBP23.3■■□□□ 1.32
SDF4-206ENST00000478938 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 AKR1B10O60218 316 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 EEF1GP26641 437 aaKnown RBP23.3■■□□□ 1.32
SDF4-206ENST00000478938 HOXC9P31274 260 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 RASSF7Q02833 373 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 NEXNQ0ZGT2 675 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 TRIM47Q96LD4 638 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 SELENOSQ9BQE4 189 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 TUBGCP2Q9BSJ2 902 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 MAGEC2Q9UBF1 373 aaPredicted RBP23.3■■□□□ 1.32
SDF4-206ENST00000478938 TBC1D2BQ9UPU7 963 aa23.3■■□□□ 1.32
SDF4-206ENST00000478938 SEPT2Q15019 361 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 CCDC57Q2TAC2 916 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 CCDC155Q8N6L0 562 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 CNOT10Q9H9A5 744 aaKnown RBP23.29■■□□□ 1.32
SDF4-206ENST00000478938 TMEM165Q9HC07 324 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 PCDHGA4Q9Y5G9 962 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 SART1O43290 800 aaKnown RBP23.29■■□□□ 1.32
SDF4-206ENST00000478938 MYBP10242 640 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 MAGEA1P43355 309 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 MRPS35P82673 323 aaKnown RBP23.29■■□□□ 1.32
SDF4-206ENST00000478938 ATP11AP98196 1134 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 CDK17Q00537 523 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 EARS2Q5JPH6 523 aaKnown RBP23.29■■□□□ 1.32
SDF4-206ENST00000478938 RRP12Q5JTH9 1297 aaKnown RBP23.29■■□□□ 1.32
SDF4-206ENST00000478938 TMEM154Q6P9G4 183 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 CACNA2D4Q7Z3S7 1137 aa23.29■■□□□ 1.32
SDF4-206ENST00000478938 RBM12BQ8IXT5 1001 aaKnown RBP23.29■■□□□ 1.32
SDF4-206ENST00000478938 RPN1P04843 607 aaKnown RBP23.28■■□□□ 1.32
SDF4-206ENST00000478938 VIMP08670 466 aaKnown RBP23.28■■□□□ 1.32
SDF4-206ENST00000478938 LACTBP83111 547 aaPredicted RBP23.28■■□□□ 1.32
SDF4-206ENST00000478938 LMNTD2Q8IXW0 634 aa23.28■■□□□ 1.32
SDF4-206ENST00000478938 NOX5Q96PH1 765 aa23.28■■□□□ 1.32
SDF4-206ENST00000478938 LY9Q9HBG7 655 aa23.28■■□□□ 1.32
SDF4-206ENST00000478938 INCENPQ9NQS7 918 aa23.28■■□□□ 1.32
SDF4-206ENST00000478938 ZNF232Q9UNY5 417 aa23.28■■□□□ 1.32
SDF4-206ENST00000478938 RFC5P40937 340 aa23.28■■□□□ 1.32
SDF4-206ENST00000478938 SLC17A8Q8NDX2 589 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms