RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PNMA6FA0A0J9YX94 578 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 BICDL2A1A5D9 508 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 PDE2AO00408 941 aaPredicted RBP12.03□□□□□ -0.48
VPS52-217ENST00000478934 MAP2K7O14733 419 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
VPS52-217ENST00000478934 AMPD3Q01432 767 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 BRD3Q15059 726 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 ASPRV1Q53RT3 343 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 SLC30A10Q6XR72 485 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 NDST4Q9H3R1 872 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 SMARCAL1Q9NZC9 954 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 ARHGAP20Q9P2F6 1191 aa12.03□□□□□ -0.48
VPS52-217ENST00000478934 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
VPS52-217ENST00000478934 ESYT2A0FGR8 921 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 MARCH6O60337 910 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 ADRA2BP18089 450 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 ZBED6P86452 979 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 CASP8Q14790 479 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 SKIDA1Q1XH10 827 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 VWA3BQ502W6 1294 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 UNC13DQ70J99 1090 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
VPS52-217ENST00000478934 SP8Q8IXZ3 490 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 MSANTD4Q8NCY6 345 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 CCDC47Q96A33 483 aaKnown RBP12.02□□□□□ -0.49
VPS52-217ENST00000478934 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 RIC8AQ9NPQ8 531 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 L1RE1Q9UN81 338 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 LY75O60449 1722 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
VPS52-217ENST00000478934 PSMD14O00487 310 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.49
VPS52-217ENST00000478934 FKBP15Q5T1M5 1219 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 KRT79Q5XKE5 535 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.49
VPS52-217ENST00000478934 RIN2Q8WYP3 895 aaPredicted RBP12.02□□□□□ -0.49
VPS52-217ENST00000478934 CRACR2AQ9BSW2 395 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 SIK3Q9Y2K2 1263 aa12.02□□□□□ -0.49
VPS52-217ENST00000478934 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 POTECB2RU33 542 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 ATP8B1O43520 1251 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 TMEM266Q2M3C6 531 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 LRRC55Q6ZSA7 311 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 RRAGAQ7L523 313 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 NOC3LQ8WTT2 800 aaKnown RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 DNAJC19Q96DA6 116 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 COA1Q9GZY4 146 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 MAGEF1Q9HAY2 307 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 ZNHIT6Q9NWK9 470 aaKnown RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 EHD2Q9NZN4 543 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 RAB21Q9UL25 225 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 KIAA1024Q9UPX6 916 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 CAPN6Q9Y6Q1 641 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 LRRC53A6NM62 1247 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 GDF11O95390 407 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 EEF2P13639 858 aaKnown RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 TNNT3P45378 269 aaPredicted RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 RBM5P52756 815 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS52-217ENST00000478934 C2orf54Q08AI8 447 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
VPS52-217ENST00000478934 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 HDXQ7Z353 690 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 CCDC42Q96M95 316 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 ERGIC2Q96RQ1 377 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 NLRC4Q9NPP4 1024 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 JADE2Q9NQC1 790 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 SALL4Q9UJQ4 1053 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 PCDHA12Q9UN75 941 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 SAR1BQ9Y6B6 198 aa12.01□□□□□ -0.49
VPS52-217ENST00000478934 G3V3G9 751 aa12□□□□□ -0.49
VPS52-217ENST00000478934 MEIS1O00470 390 aa12□□□□□ -0.49
VPS52-217ENST00000478934 ZBTB5O15062 677 aa12□□□□□ -0.49
VPS52-217ENST00000478934 MOCS3O95396 460 aa12□□□□□ -0.49
VPS52-217ENST00000478934 MYBL2P10244 700 aa12□□□□□ -0.49
VPS52-217ENST00000478934 CXCR5P32302 372 aa12□□□□□ -0.49
VPS52-217ENST00000478934 NT5C2P49902 561 aa12□□□□□ -0.49
VPS52-217ENST00000478934 JAG1P78504 1218 aa12□□□□□ -0.49
VPS52-217ENST00000478934 KCNMA1Q12791 1236 aa12□□□□□ -0.49
VPS52-217ENST00000478934 COASYQ13057 564 aa12□□□□□ -0.49
VPS52-217ENST00000478934 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
VPS52-217ENST00000478934 TMEM119Q4V9L6 283 aa12□□□□□ -0.49
VPS52-217ENST00000478934 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
VPS52-217ENST00000478934 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
VPS52-217ENST00000478934 CERS3Q8IU89 383 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms