RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 M0R2N6 131 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 MEIS2O14770 477 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
PDCD11-204ENST00000478543 ERCC3P19447 782 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 COL9A1P20849 921 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 CLK2P49760 499 aaKnown RBP13.35□□□□□ -0.27
PDCD11-204ENST00000478543 LHX8Q68G74 356 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 SLC30A10Q6XR72 485 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 FCHSD1Q86WN1 690 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 MAFAQ8NHW3 353 aaPredicted RBP13.35□□□□□ -0.27
PDCD11-204ENST00000478543 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
PDCD11-204ENST00000478543 MORF4L1Q9UBU8 362 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 SLC25A27O95847 323 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 CYP2B6P20813 491 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 MYSM1Q5VVJ2 828 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 RNF207Q6ZRF8 634 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 CHST13Q8NET6 341 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 PORCNQ9H237 461 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
PDCD11-204ENST00000478543 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 SPDYE3A6NKU9 549 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 COPB2P35606 906 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 HSD17B4P51659 736 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 RPS6P62753 249 aaKnown RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 CCNA1P78396 465 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 BAATQ14032 418 aaPredicted RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 NBR1Q14596 966 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 NONOQ15233 471 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 INF2Q27J81 1249 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 ANKRD35Q8N283 1001 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 ANO3Q9BYT9 981 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 NOL7Q9UMY1 257 aaKnown RBP13.33□□□□□ -0.28
PDCD11-204ENST00000478543 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
PDCD11-204ENST00000478543 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 CCL14Q16627 93 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 USP38Q8NB14 1042 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 PURBQ96QR8 312 aaKnown RBP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 MMP19Q99542 508 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 FTOQ9C0B1 505 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 MROH8Q9H579 483 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
PDCD11-204ENST00000478543 TFIP11Q9UBB9 837 aaKnown RBP13.32□□□□□ -0.28
PDCD11-204ENST00000478543 WNT7AO00755 349 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
PDCD11-204ENST00000478543 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
PDCD11-204ENST00000478543 GHRHRQ02643 423 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 SHHQ15465 462 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 MCTP2Q6DN12 878 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
PDCD11-204ENST00000478543 FIBPO43427 364 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
PDCD11-204ENST00000478543 KRT85P78386 507 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 KCTD2Q14681 263 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 LETM2Q2VYF4 491 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 RILPL1Q5EBL4 403 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 TTC38Q5R3I4 469 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 USP6NLQ92738 828 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 USP28Q96RU2 1077 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 PCDHB6Q9Y5E3 794 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
PDCD11-204ENST00000478543 PGK2P07205 417 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 FCER1AP12319 257 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 EIF2AK2P19525 551 aaKnown RBP13.29□□□□□ -0.28
PDCD11-204ENST00000478543 MAPK4P31152 587 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 ZNF174Q15697 407 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 GPR142Q7Z601 462 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 PLEKHH3Q7Z736 793 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 NEK8Q86SG6 692 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 TEX2Q8IWB9 1127 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
PDCD11-204ENST00000478543 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 RMDN3Q96TC7 470 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms