RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 ARHGAP1Q07960 439 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 TTLL4Q14679 1199 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 RTN1Q16799 776 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 TYW1BQ6NUM6 668 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 SLC43A3Q8NBI5 491 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 BRF1Q92994 677 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
SKI-202ENST00000478223 MAP3K20Q9NYL2 800 aaKnown RBP13.51□□□□□ -0.25
SKI-202ENST00000478223 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
SKI-202ENST00000478223 CDH23Q9H251 3354 aa13.51□□□□□ -0.25
SKI-202ENST00000478223 B4DLN1 442 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 SORBS3O60504 671 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 MYL3P08590 195 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
SKI-202ENST00000478223 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
SKI-202ENST00000478223 MRPS9P82933 396 aaKnown RBP13.5□□□□□ -0.25
SKI-202ENST00000478223 PURAQ00577 322 aaKnown RBP13.5□□□□□ -0.25
SKI-202ENST00000478223 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 UBE2SQ16763 222 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 VSIG10LQ86VR7 867 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 TOX2Q96NM4 488 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 BCAS3Q9H6U6 928 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 DDX41Q9UJV9 622 aaKnown RBP13.5□□□□□ -0.25
SKI-202ENST00000478223 TBX21Q9UL17 535 aa13.5□□□□□ -0.25
SKI-202ENST00000478223 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
SKI-202ENST00000478223 A0A1W2PPC1 479 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 A6NJR5 290 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 RBAK-RBAKDNI3L0D1 243 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 NKRFO15226 690 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■□□□ 14.3
SKI-202ENST00000478223 EIF3JO75822 258 aaKnown RBP13.49□□□□□ -0.25
SKI-202ENST00000478223 CD4P01730 458 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
SKI-202ENST00000478223 CPT1AP50416 773 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 EPHB4P54760 987 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 SP2Q02086 613 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
SKI-202ENST00000478223 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 TDHQ8IZJ6 230 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 SAMD3Q8N6K7 520 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 AFG1LQ8WV93 481 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
SKI-202ENST00000478223 PRKAG2Q9UGJ0 569 aa13.49□□□□□ -0.25
SKI-202ENST00000478223 UMODL1Q5DID0 1318 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 MROH7Q68CQ1 1323 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 EVPLQ92817 2033 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 ADAMTS3O15072 1205 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 EPB41L2O43491 1005 aaKnown RBP13.48□□□□□ -0.25
SKI-202ENST00000478223 ZEB2O60315 1214 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 B4GALT4O60513 344 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 GH1P01241 217 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 MMP3P08254 477 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 CCND2P30279 289 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
SKI-202ENST00000478223 FGD1P98174 961 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 TRAF1Q13077 416 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 SEMA3FQ13275 785 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 C9orf50Q5SZB4 431 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 SMARCC2Q8TAQ2 1214 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
SKI-202ENST00000478223 LARP6Q9BRS8 491 aaKnown RBP13.48□□□□□ -0.25
SKI-202ENST00000478223 TRPV6Q9H1D0 765 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 ZSWIM6Q9HCJ5 1215 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 TELO2Q9Y4R8 837 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 MRVI1Q9Y6F6 885 aa13.48□□□□□ -0.25
SKI-202ENST00000478223 STXBP3O00186 592 aa13.47□□□□□ -0.25
SKI-202ENST00000478223 CABYRO75952 493 aa13.47□□□□□ -0.25
SKI-202ENST00000478223 UBA1P22314 1058 aaKnown RBP13.47□□□□□ -0.25
SKI-202ENST00000478223 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
SKI-202ENST00000478223 MTG1Q9BT17 334 aaPredicted RBP13.47□□□□□ -0.25
SKI-202ENST00000478223 UPF3BQ9BZI7 483 aaKnown RBP13.47□□□□□ -0.25
SKI-202ENST00000478223 PPP1R12CQ9BZL4 782 aa13.47□□□□□ -0.25
SKI-202ENST00000478223 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
SKI-202ENST00000478223 V9GY48 417 aaPredicted RBP13.47□□□□□ -0.25
SKI-202ENST00000478223 MICAL3Q7RTP6 2002 aa13.47□□□□□ -0.25
SKI-202ENST00000478223 SEC24BO95487 1268 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 TIMP1P01033 207 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 RAG1P15918 1043 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 RCAN1P53805 252 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 SHHQ15465 462 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 NTRK3Q16288 839 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 NBPF20Q3BBV1 942 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 MYSM1Q5VVJ2 828 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 KAT2BQ92831 832 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 CUL5Q93034 780 aa13.46□□□□□ -0.25
SKI-202ENST00000478223 PHKBQ93100 1093 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms