RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 PAEPP09466 180 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 GHRP10912 638 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 MAGEA1P43355 309 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 RPS6KA3P51812 740 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 ATP2C1P98194 919 aaPredicted RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 CSGALNACT2Q8N6G5 542 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 FANCBQ8NB91 859 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 CNOT6LQ96LI5 555 aaKnown RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 CPSF2Q9P2I0 782 aaKnown RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 FBXL5Q9UKA1 691 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 KLRC4O43908 158 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 PALMO75781 387 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 ITGA6P23229 1130 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 MCM7P33993 719 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 CDK17Q00537 523 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 MAP3K12Q12852 859 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 NAALADL2Q58DX5 795 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 CRELD2Q6UXH1 353 aaPredicted RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 INPP4AQ96PE3 977 aaPredicted RBP10.84□□□□□ -0.67
COL13A1-207ENST00000478219 PHF20Q9BVI0 1012 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 GOLPH3Q9H4A6 298 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 THAP9Q9H5L6 903 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 ABCF3Q9NUQ8 709 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
COL13A1-207ENST00000478219 LRRC53A6NM62 1247 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 PRKAB2O43741 272 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 MYBP10242 640 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 VEGFAP15692 232 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 KRT2P35908 639 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 ALDH5A1P51649 535 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 KIF2BQ8N4N8 673 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 UBLCP1Q8WVY7 318 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 HPS3Q969F9 1004 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 ZNF317Q96PQ6 595 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 NOC4LQ9BVI4 516 aaKnown RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 PIDD1Q9HB75 910 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 MAGEC2Q9UBF1 373 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 CORO1CQ9ULV4 474 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 MYH2Q9UKX2 1941 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 LRP6O75581 1613 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 MPHOSPH10O00566 681 aaKnown RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 CTNND1O60716 968 aaKnown RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 KIF4AO95239 1232 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 LCA5LO95447 670 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 TUBP50607 506 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 EHHADHQ08426 723 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 ZC3H12AQ5D1E8 599 aaKnown RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 LRIG3Q6UXM1 1119 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 TNFRSF25Q93038 417 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 CHMP6Q96FZ7 201 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 XPO6Q96QU8 1125 aaKnown RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 STRBPQ96SI9 672 aaKnown RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 PCDHGC5Q9Y5F6 944 aa10.83□□□□□ -0.68
COL13A1-207ENST00000478219 V9GY48 417 aaPredicted RBP10.83□□□□□ -0.68
COL13A1-207ENST00000478219 A6NHS1 94 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 PLEKHA8P1O95397 391 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 MTIF2P46199 727 aaKnown RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 RIPK1Q13546 671 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 BLMHQ13867 455 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 ZNF268Q14587 947 aaPredicted RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 WTAPQ15007 396 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 RBBP5Q15291 538 aaKnown RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 ERMARDQ5T6L9 678 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 RRAGAQ7L523 313 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 IFNL3Q8IZI9 196 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 ZNF654Q8IZM8 581 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 CCDC155Q8N6L0 562 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 RETREG2Q8NC44 543 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 CCDC197Q8NCU1 140 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 ISCUQ9H1K1 167 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 NOP53Q9NZM5 478 aaKnown RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 PNMA2Q9UL42 364 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 TMEM94Q12767 1356 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 NFAT5O94916 1531 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 ERICH2A1L162 156 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 SHBGP04278 402 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 HNRNPH3P31942 346 aaKnown RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 ASTE1Q2TB18 679 aaPredicted RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 TBC1D25Q3MII6 688 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 GNPTABQ3T906 1256 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 LRRC34Q8IZ02 419 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 PIAS4Q8N2W9 510 aaPredicted RBP10.82□□□□□ -0.68
COL13A1-207ENST00000478219 PLBD2Q8NHP8 589 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 NOX5Q96PH1 765 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 SLC52A2Q9HAB3 445 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 SIK3Q9Y2K2 1263 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 DISP2A7MBM2 1401 aa10.82□□□□□ -0.68
COL13A1-207ENST00000478219 A0A1B0GVG6 124 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 DPPA5A6NC42 116 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PJA2O43164 708 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 CIAO1O76071 339 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms