RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PANK1Q8TE04 598 aa11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 SSH3Q8TE77 659 aa11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 CHMP4CQ96CF2 233 aa11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 DNAJC2Q99543 621 aaKnown RBP11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 ADD3Q9UEY8 706 aaKnown RBP11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 FAM186AA6NE01 2351 aa11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 MYO7AQ13402 2215 aa11.55□□□□□ -0.56
SMARCB1-206ENST00000477836 NKRFO15226 690 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 CTNNB1P35222 781 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 NDUFV1P49821 464 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 NUBP1P53384 320 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 ATP8B2P98198 1209 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 SLFN13Q68D06 897 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 AACSQ86V21 672 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 SESTD1Q86VW0 696 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 EXOC6Q8TAG9 804 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 NKD2Q969F2 451 aaPredicted RBP11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 TNNQ9UQP3 1299 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 SLC4A4Q9Y6R1 1079 aa11.54□□□□□ -0.56
SMARCB1-206ENST00000477836 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 EYA4O95677 639 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 PDGFBP01127 241 aaPredicted RBP11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 RLBP1P12271 317 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 PDE4BQ07343 736 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 CBX2Q14781 532 aaPredicted RBP11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 FRMD5Q7Z6J6 570 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 GMCL1P1Q8NEA9 526 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 MKL1Q969V6 931 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 MSLNLQ96KJ4 702 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 GTF2IRD1Q9UHL9 959 aa11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 NOP58Q9Y2X3 529 aaKnown RBP11.53□□□□□ -0.56
SMARCB1-206ENST00000477836 ZNF292O60281 2723 aa11.52□□□□□ -0.56
SMARCB1-206ENST00000477836 IGKV6D-41A0A0C4DH26 115 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 GRM6O15303 877 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 TXNP10599 105 aaKnown RBP11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 ADD2P35612 726 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 ADAM15Q13444 863 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 DGLUCYQ7Z3D6 616 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 C7orf31Q8N865 590 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 STAG1Q8WVM7 1258 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 WNT8BQ93098 351 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 TOP1MTQ969P6 601 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 CEP95Q96GE4 821 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 CNTNAP3BQ96NU0 1288 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 CNTNAP3Q9BZ76 1288 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 LMAN2LQ9H0V9 348 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 ARPP21Q9UBL0 812 aaPredicted RBP11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 CCPG1Q9ULG6 757 aa11.52□□□□□ -0.57
SMARCB1-206ENST00000477836 EPG5Q9HCE0 2579 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 TTLL1O95922 423 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 PDE4DQ08499 809 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 PTK7Q13308 1070 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 TRIM71Q2Q1W2 868 aaKnown RBP11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 KAT2BQ92831 832 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 RMDN1Q96DB5 314 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 RIPOR3Q96MK2 946 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 ALG1Q9BT22 464 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 MTMR4Q9NYA4 1195 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 DDX19BQ9UMR2 479 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 EMSYQ7Z589 1322 aa11.51□□□□□ -0.57
SMARCB1-206ENST00000477836 LOC102724159A0A0B4J2E5 919 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 PTPDC1A2A3K4 754 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 C5orf67F2Z3F1 127 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 PRDM1O75626 825 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 ARIH2O95376 493 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 CHGBP05060 677 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 RB1P06400 928 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 MMP3P08254 477 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 MCCP23508 829 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 ICAM3P32942 547 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 SLC1A4P43007 532 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 PLEKHG4Q58EX7 1191 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 ZBTB33Q86T24 672 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 ZNF444Q8N0Y2 327 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 FIBCD1Q8N539 461 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 SMRP1Q8NCR6 262 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 PHF7Q9BWX1 381 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 IFIH1Q9BYX4 1025 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms