RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 PSMA5P28066 241 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 DUSP28Q4G0W2 176 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 MFSD5Q6N075 450 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 CXCL17Q6UXB2 119 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 Q6ZUG5 572 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 TMTC3Q6ZXV5 915 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 USP26Q9BXU7 913 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 NAP1L2Q9ULW6 460 aaPredicted RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 KIAA1217Q5T5P2 1943 aa16.31■□□□□ 0.2
PDE6D-204ENST00000477748 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
PDE6D-204ENST00000477748 PPIGQ13427 754 aaKnown RBP eCLIP16.31■□□□□ 0.2
PDE6D-204ENST00000477748 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
PDE6D-204ENST00000477748 STXBP2Q15833 593 aa16.31■□□□□ 0.2
PDE6D-204ENST00000477748 RTN1Q16799 776 aa16.31■□□□□ 0.2
PDE6D-204ENST00000477748 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
PDE6D-204ENST00000477748 SCFD2Q8WU76 684 aa16.31■□□□□ 0.2
PDE6D-204ENST00000477748 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 hCG_1642624A0A1W2PR95 340 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■■□□ 15.6
PDE6D-204ENST00000477748 CD4P01730 458 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 NR3C2P08235 984 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 CPT1AP50416 773 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 EPHB4P54760 987 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 TTLL4Q14679 1199 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 TMEM199Q8N511 208 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 BRF1Q92994 677 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
PDE6D-204ENST00000477748 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
PDE6D-204ENST00000477748 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
PDE6D-204ENST00000477748 BRDTQ58F21 947 aaPredicted RBP16.29■□□□□ 0.2
PDE6D-204ENST00000477748 OR6J1Q8NGC5 347 aa16.29■□□□□ 0.2
PDE6D-204ENST00000477748 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
PDE6D-204ENST00000477748 CUL5Q93034 780 aa16.29■□□□□ 0.2
PDE6D-204ENST00000477748 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
PDE6D-204ENST00000477748 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
PDE6D-204ENST00000477748 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
PDE6D-204ENST00000477748 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
PDE6D-204ENST00000477748 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDE6D-204ENST00000477748 RCAN1P53805 252 aa16.28■□□□□ 0.2
PDE6D-204ENST00000477748 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
PDE6D-204ENST00000477748 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDE6D-204ENST00000477748 COPS5Q92905 334 aa16.28■□□□□ 0.2
PDE6D-204ENST00000477748 ARIH2O95376 493 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 PGM5Q15124 567 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 RUFY3Q7L099 469 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 HEATR3Q7Z4Q2 680 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 FBXL16Q8N461 479 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 PPP1R12CQ9BZL4 782 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 HIPK3Q9H422 1215 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 ZSWIM6Q9HCJ5 1215 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.2
PDE6D-204ENST00000477748 CYP46A1Q9Y6A2 500 aa16.27■□□□□ 0.2
PDE6D-204ENST00000477748 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.19
PDE6D-204ENST00000477748 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 KPNA6O60684 536 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 CSF2RAP15509 400 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 CDC27P30260 824 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 CCND2P30279 289 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 PURAQ00577 322 aaKnown RBP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 LY6KQ17RY6 165 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 CCDC62Q6P9F0 684 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 FAM161BQ96MY7 647 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 MTG1Q9BT17 334 aaPredicted RBP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 AGXT2Q9BYV1 514 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 SEMA6BQ9H3T3 888 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 PSTPIP2Q9H939 334 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 MRVI1Q9Y6F6 885 aa16.26■□□□□ 0.19
PDE6D-204ENST00000477748 V9GY48 417 aaPredicted RBP16.26■□□□□ 0.19
PDE6D-204ENST00000477748 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 MEIS2O14770 477 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 B4GALT4O60513 344 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 GH1P01241 217 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 MYL3P08590 195 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 ADD1P35611 737 aaKnown RBP16.25■□□□□ 0.19
PDE6D-204ENST00000477748 PSMC6P62333 389 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 FUT2Q10981 343 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 TMEM240Q5SV17 173 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms