RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MYO5AQ9Y4I1 1855 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 FOXP2O15409 715 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 UBASH3AP57075 661 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 SLC7A5Q01650 507 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 STK3Q13188 491 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 NFIXQ14938 502 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 ALX1Q15699 326 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 GALNT17Q6IS24 598 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 TOGARAM2Q6ZUX3 1019 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 MAATS1Q7Z4T9 603 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 C1orf131Q8NDD1 294 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 LLPHQ9BRT6 129 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 GOLPH3LQ9H4A5 285 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 L3MBTL1Q9Y468 752 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 ZMYM6O95789 1325 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 BRWD3Q6RI45 1802 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 DIAPH2O60879 1101 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 TRIM37O94972 964 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 VDRP11473 427 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 TBX2Q13207 712 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 NCAPHQ15003 741 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 PUS10Q3MIT2 529 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 SH2D4BQ5SQS7 431 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 LMNTD2Q8IXW0 634 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 ZNHIT6Q9NWK9 470 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 WDR19Q8NEZ3 1342 aa13.93□□□□□ -0.18
RTFDC1-207ENST00000477573 TAF1P21675 1872 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 UBR3Q6ZT12 1888 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 HAND2P61296 217 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 ZNF268Q14587 947 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 PPP4R3AQ6IN85 833 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 AENQ8WTP8 325 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 SPIRE2Q8WWL2 714 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 NACAP1Q9BZK3 213 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 VCX3BQ9H321 246 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 VCX3AQ9NNX9 186 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 DDX25Q9UHL0 483 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 PRC1O43663 620 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 FLOT1O75955 427 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 GYG1P46976 350 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 LMNB2Q03252 620 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 USH1GQ495M9 461 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 OLFML1Q6UWY5 402 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 SMC1BQ8NDV3 1235 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 NAF1Q96HR8 494 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 NAA15Q9BXJ9 866 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 NDST4Q9H3R1 872 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 TMED5Q9Y3A6 229 aa13.92□□□□□ -0.18
RTFDC1-207ENST00000477573 STIP1P31948 543 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 CBX3Q13185 183 aa13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 KARSQ15046 597 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 FAM84BQ96KN1 310 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 NDNQ99608 321 aa13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 MRPL44Q9H9J2 332 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 COL4A1P02462 1669 aa13.91□□□□□ -0.18
RTFDC1-207ENST00000477573 A0A0G2JLW4 131 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 GOLGA6L10A0A0M3HER8 536 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 PPIP5K2O43314 1243 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 BCRP11274 1271 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 MDH1P40925 334 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 ATL3Q6DD88 541 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 FBXO33Q7Z6M2 555 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 WHAMMQ8TF30 809 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 NAPBQ9H115 298 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 PDS5AQ29RF7 1337 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 C5orf60A6NFR6 353 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 GSTA2P09210 222 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 FAM200BP0CF97 657 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 GYS1P13807 737 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 XBP1P17861 261 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 TM4SF1P30408 202 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 GRAPQ13588 217 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 PPP1R7Q15435 360 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 IFI16Q16666 785 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 GLE1Q53GS7 698 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 TTMPQ5BVD1 217 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 ZNF569Q5MCW4 686 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 ANKRD20A2Q5SQ80 823 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 ANKRD20A1Q5TYW2 823 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 ANKRD20A3Q5VUR7 823 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 NCCRP1Q6ZVX7 275 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms