RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 LRRC4CQ9HCJ2 640 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 IFT57Q9NWB7 429 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CEP131Q9UPN4 1083 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 BRCA1P38398 1863 aaKnown RBP6.77□□□□□ -1.33
VPS45-207ENST00000477558 COL15A1P39059 1388 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 AFDNP55196 1824 aaKnown RBP6.77□□□□□ -1.33
VPS45-207ENST00000477558 ANKRD36CQ5JPF3 1778 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 PRAMEF22A3QJZ6 481 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 MEIS3P2A8K0S8 358 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 SNRPA1P09661 255 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 ACRP10323 421 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 NME1P15531 152 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 RAG1P15918 1043 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 EIF5P55010 431 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 EIF6P56537 245 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 LSRQ86X29 649 aaPredicted RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 SHDQ96IW2 340 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 CCDC74BQ96LY2 380 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 TEX13AQ9BXU3 409 aaPredicted RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 TPX2Q9ULW0 747 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 ZBTB1Q9Y2K1 713 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 DLEC1Q9Y238 1755 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 USP42Q9H9J4 1324 aaKnown RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 NUP98P52948 1817 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 FAM86C2PA6NEL3 165 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 UBOX5O94941 541 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 HOXB7P09629 217 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 IMPDH2P12268 514 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 IL6STP40189 918 aaPredicted RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 GIPRP48546 466 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 RBBP8NLQ8NC74 664 aaPredicted RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 CRBNQ96SW2 442 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 SLC9A7Q96T83 725 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 GMLQ99445 158 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
VPS45-207ENST00000477558 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
VPS45-207ENST00000477558 TFCP2L1Q9NZI6 479 aa6.76□□□□□ -1.33
VPS45-207ENST00000477558 C10orf71Q711Q0 1435 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 PRR33A8MZF0 331 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 RGS13O14921 159 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 CYP26A1O43174 497 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 MED26O95402 600 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 STARD3NLO95772 234 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 FGRP09769 529 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 GYS1P13807 737 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 GBP1P32455 592 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 CALD1Q05682 793 aaKnown RBP6.75□□□□□ -1.33
VPS45-207ENST00000477558 SMIM5Q71RC9 77 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 FAM169BQ8N8A8 192 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 GOLGA2P5Q9HBQ8 144 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 SPON1Q9HCB6 807 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 MIS18AQ9NYP9 233 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 TSPYL4Q9UJ04 414 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 RNF112Q9ULX5 631 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 USP16Q9Y5T5 823 aa6.75□□□□□ -1.33
VPS45-207ENST00000477558 ARFGEF2Q9Y6D5 1785 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 ANKRD31Q8N7Z5 1873 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 ATP10DQ9P241 1426 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 TNFRSF10CO14798 259 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 ZBTB7AO95365 584 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 CBX7O95931 251 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 FOSL1P15407 271 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 ETFBP38117 255 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 OXCT1P55809 520 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 GNAI1P63096 354 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 ZYXQ15942 572 aaKnown RBP6.74□□□□□ -1.33
VPS45-207ENST00000477558 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
VPS45-207ENST00000477558 PRDM5Q9NQX1 630 aaPredicted RBP6.74□□□□□ -1.33
VPS45-207ENST00000477558 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
VPS45-207ENST00000477558 N4BP2Q86UW6 1770 aaPredicted RBP6.73□□□□□ -1.33
VPS45-207ENST00000477558 LRRN2O75325 713 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS45-207ENST00000477558 SSTR4P31391 388 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 KRT24Q2M2I5 525 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 INTS3Q68E01 1043 aaKnown RBP6.73□□□□□ -1.33
VPS45-207ENST00000477558 TMEM192Q8IY95 271 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 FAM9BQ8IZU0 186 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 GTF2IRD1Q9UHL9 959 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 NARFQ9UHQ1 456 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 PLAGL2Q9UPG8 496 aa6.73□□□□□ -1.33
VPS45-207ENST00000477558 COL11A2P13942 1736 aaPredicted RBP6.73□□□□□ -1.33
VPS45-207ENST00000477558 FANCIQ9NVI1 1328 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 LAMB2P55268 1798 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS45-207ENST00000477558 CAMTA2O94983 1202 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 A1BGP04217 495 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 ITIH2P19823 946 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 UNC5AQ6ZN44 842 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 PLD6Q8N2A8 252 aaKnown RBP6.72□□□□□ -1.33
VPS45-207ENST00000477558 VWCEQ96DN2 955 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 KREMEN1Q96MU8 473 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms