RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 USP11P51784 963 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 USH1GQ495M9 461 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 FAM114A1Q8IWE2 563 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 ZNF507Q8TCN5 953 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 WDR24Q96S15 920 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 LRRC27Q9C0I9 530 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 SEMA6BQ9H3T3 888 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 A0A1W2PQC6 194 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 B4DLN1 442 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 MEIS2O14770 477 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 IDEP14735 1019 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 KRT9P35527 623 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 ERVK-24P63145 666 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 ELF2Q15723 593 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 TMTC1Q8IUR5 882 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 LRRN4CLQ8ND94 238 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 EEF2KMTQ96G04 330 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 CNOT6LQ96LI5 555 aaKnown RBP12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 TUBGCP2Q9BSJ2 902 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 SYT17Q9BSW7 474 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 PIM2Q9P1W9 311 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
HLA-DMB-260ENST00000477537 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 A0A1W2PRG0 241 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 PSMD14O00487 310 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 TAL1P17542 331 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 CYP3A7P24462 503 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 MTIF2P46199 727 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 DNM2P50570 870 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 DLGAP5Q15398 846 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 GRIPAP1Q4V328 841 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 CYP26C1Q6V0L0 522 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 LARGE2Q8N3Y3 721 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 DDX12PQ92771 950 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 KCNMB3Q9NPA1 279 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 LZTFL1Q9NQ48 299 aa12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-260ENST00000477537 KDM3AQ9Y4C1 1321 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 A0A0U1RQJ8 604 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 TTC26A0AVF1 554 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 HYIQ5T013 277 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 CENPPQ6IPU0 288 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 ACRBPQ8NEB7 543 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 MBOAT7Q96N66 472 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 P2RX7Q99572 595 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 NT5C3AQ9H0P0 336 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 HDAC9Q9UKV0 1011 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 VIL1P09327 827 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 STAT3P40763 770 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 ECE1P42892 770 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 MCTP2Q6DN12 878 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 MOXD1Q6UVY6 613 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 BTNL9Q6UXG8 535 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 SLFN12Q8IYM2 578 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 GUF1Q8N442 669 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 PSMD1Q99460 953 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 ARHGEF10LQ9HCE6 1279 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 KIAA1024Q9UPX6 916 aa12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 LUC7L2Q9Y383 392 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-260ENST00000477537 COL4A5P29400 1685 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 SPDYE3A6NKU9 549 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 E9PMD0 336 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 MMP14P50281 582 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 PSMD2Q13200 908 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 PRR16Q569H4 304 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 OR8K1Q8NGG5 319 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 CRYGNQ8WXF5 182 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 GMLQ99445 158 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 CAPN11Q9UMQ6 739 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
HLA-DMB-260ENST00000477537 POTEB3A0JP26 581 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 SMCHD1A6NHR9 2005 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 POTECB2RU33 542 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 KIF5CO60282 957 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 FOSP01100 380 aaPredicted RBP12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 HOXA7P31268 230 aaPredicted RBP12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 EHHADHQ08426 723 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms