RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 SGCGQ13326 291 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 FBXW10Q5XX13 1052 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 CREB3L3Q68CJ9 461 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 CRTC1Q6UUV9 634 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 OTOP3Q7RTS5 596 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 FCHSD1Q86WN1 690 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 C7orf61Q8IZ16 206 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 NEK11Q8NG66 645 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 TTC25Q96NG3 672 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 OCSTAMPQ9BR26 566 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 MXD3Q9BW11 206 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 OXCT2Q9BYC2 517 aaPredicted RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 ESYT3A0FGR9 886 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 TTC34A8MYJ7 566 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 CDK4P11802 303 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 ATP6V1E1P36543 226 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 HADHAP40939 763 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 RAD52P43351 418 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 WDR4P57081 412 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 SERINC3Q13530 473 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 PPA1Q15181 289 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 TMEM53Q6P2H8 277 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 PTF1AQ7RTS3 328 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 PALB2Q86YC2 1186 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 TAB3Q8N5C8 712 aaPredicted RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 SPATA18Q8TC71 538 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 RBM41Q96IZ5 413 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 SRPK1Q96SB4 655 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 NCOA5Q9HCD5 579 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 GAKO14976 1311 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 LOC102724428A0A0B4J2F2 783 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CCDC169A6NNP5 214 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 MCF2LO15068 1137 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 HDAC3O15379 428 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 AKAP10O43572 662 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 NCK2O43639 380 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 FGRP09769 529 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 PNMA6AP0CW24 399 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 SLC5A1P13866 664 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 GRK2P25098 689 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 YY1P25490 414 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 POLR2BP30876 1174 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CTNNA1P35221 906 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 IDUAP35475 653 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 ATP5OP48047 213 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 SIK1P57059 783 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 B2MP61769 119 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 MRPS5P82675 430 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 PTK2Q05397 1052 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 TCIRG1Q13488 830 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 RBM20Q5T481 1227 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 PDE12Q6L8Q7 609 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 SYCP3Q8IZU3 236 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 RASSF8Q8NHQ8 419 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CUL5Q93034 780 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CTAGE1Q96RT6 745 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 BARD1Q99728 777 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 RTFDC1Q9BY42 306 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 ST7Q9NRC1 585 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 FNIP2Q9P278 1114 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 KDRP35968 1356 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 A0A1W2PQ67 120 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 SNX4O95219 450 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 TGDSO95455 350 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 OLFM2O95897 454 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 SKIP12755 728 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 DESP17661 470 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 EVI2BP34910 448 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 BYSLQ13895 437 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 DPYSQ14117 519 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 MORC3Q14149 939 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 LRRFIP1Q32MZ4 808 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 LRRC23Q53EV4 343 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 SETMARQ53H47 684 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 METTL24Q5JXM2 366 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 THEMIS2Q5TEJ8 643 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CAPN12Q6ZSI9 719 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 ATG9AQ7Z3C6 839 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 DNAJB7Q7Z6W7 309 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 TBC1D1Q86TI0 1168 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CABP7Q86V35 215 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 RNF168Q8IYW5 571 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 FAM26EQ8N5C1 309 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CCDC150Q8NCX0 1101 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 ALKBH8Q96BT7 664 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 GJD4Q96KN9 370 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 GPATCH1Q9BRR8 931 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CARD11Q9BXL7 1154 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CYP4F11Q9HBI6 524 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 CD93Q9NPY3 652 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 A1CFQ9NQ94 594 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 TBC1D22BQ9NU19 505 aa6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 TUBA8Q9NY65 449 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-205ENST00000476791 FAM53CQ9NYF3 392 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms