RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 RPSAP08865 295 aaKnown RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 IFNAR1P17181 557 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 PTPREP23469 700 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TM4SF1P30408 202 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 EIF4A3P38919 411 aaKnown RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TTC31Q49AM3 519 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 OTUD6AQ7L8S5 288 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TBC1D31Q96DN5 1066 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF668Q96K58 619 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TSG101Q99816 390 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 EPB41L5Q9HCM4 733 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 PRM3Q9NNZ6 103 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 INTS13Q9NVM9 706 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 PIM2Q9P1W9 311 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 KIAA1024Q9UPX6 916 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 FHOD1Q9Y613 1164 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 CAPN7Q9Y6W3 813 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TOGARAM1Q9Y4F4 1720 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 GOLGA6L9A6NEM1 432 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 ERVV-1B6SEH8 477 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 EBAG9O00559 213 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 CTIFO43310 598 aaKnown RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 STX10O60499 249 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 MFAP3LO75121 409 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 NDUFA10O95299 355 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 GYPCP04921 128 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF211Q13398 564 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 KIAA0753Q2KHM9 967 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 SV2BQ7L1I2 683 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 DAAM2Q86T65 1068 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 PNMA8AQ86V59 439 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 POTEDQ86YR6 584 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 REXO1L1PQ8IX06 675 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TMTC2Q8N394 836 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 GLIS3Q8NEA6 775 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 HDAC7Q8WUI4 952 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 JDP2Q8WYK2 163 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 FAM118BQ9BPY3 351 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 FBXO2Q9UK22 296 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 BAG3O95817 575 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 BTDP43251 543 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 STK4Q13043 487 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 ZKSCAN8Q15776 578 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 CALCRLQ16602 461 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TTBK2Q6IQ55 1244 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TPH2Q8IWU9 490 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 PIGOQ8TEQ8 1089 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 TBC1D5Q92609 795 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 LACRTQ9GZZ8 138 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 NBPF3Q9H094 633 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 PCIF1Q9H4Z3 704 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-204ENST00000476379 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
CCDC39-204ENST00000476379 NCAPD2Q15021 1401 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 E9PMD0 336 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ACTN4O43707 911 aaKnown RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ECE2O60344 883 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 GCNT3O95395 438 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ACTN1P12814 892 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ERVK-24P63145 666 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 KLHL30Q0D2K2 578 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 UBE3CQ15386 1083 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 MAP1SQ66K74 1059 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF746Q6NUN9 644 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 SARM1Q6SZW1 724 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ANKRD42Q8N9B4 389 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 U2AF1L4Q8WU68 220 aaKnown RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 MTFR1LQ9H019 292 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 GBP3Q9H0R5 595 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 NHEJ1Q9H9Q4 299 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 KCNK9Q9NPC2 374 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ABHD10Q9NUJ1 306 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 BABAM1Q9NWV8 329 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 USP17L5A8MUK1 530 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 PSMD14O00487 310 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 TBC1D8O95759 1140 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 MYCNP04198 464 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 IFT88Q13099 833 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 TMTC1Q8IUR5 882 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 REXO1Q8N1G1 1221 aaKnown RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 OTUD6BQ8N6M0 293 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 COG1Q8WTW3 980 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC127Q96BQ5 260 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 FAM84AQ96KN4 292 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 C6orf50Q9HD87 102 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 USTQ9Y2C2 406 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 PRPF6O94906 941 aaKnown RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 MYBL1P10243 752 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 PRELPP51888 382 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 ACTN3Q08043 901 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 NONOQ15233 471 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 RABL6Q3YEC7 729 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 C2CD6Q53TS8 623 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 SYCP2LQ5T4T6 812 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 CERS5Q8N5B7 392 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 MASTLQ96GX5 879 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 LRRC1Q9BTT6 524 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 BRIP1Q9BX63 1249 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 OSBPL5Q9H0X9 879 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms