RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 A0A1W2PQC6 194 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 A0A1W2PQD8 194 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 PPP1R12AO14974 1030 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-211ENST00000476215 EPHB3P54753 998 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 SSPNQ14714 243 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 RAB3GAP1Q15042 981 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 PAQR3Q6TCH7 311 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 KCNT2Q6UVM3 1135 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 C16orf86Q6ZW13 317 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 MZB1Q8WU39 189 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 EPB41L4AQ9HCS5 686 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-211ENST00000476215 KCTD3Q9Y597 815 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 SHROOM4Q9ULL8 1493 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 C7orf72A4D263 438 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 NUAK1O60285 661 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 NPHS1O60500 1241 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 C6orf222P0C671 652 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-211ENST00000476215 GLI4P10075 376 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 LCP1P13796 627 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 IGFBP6P24592 240 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-211ENST00000476215 GABREP78334 506 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 CAP1Q01518 475 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 TCEA2Q15560 299 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 TESK1Q15569 626 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 ZNF385BQ569K4 471 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 STYK1Q6J9G0 422 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 LDHDQ86WU2 507 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 IGDCC3Q8IVU1 814 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 RCBTB1Q8NDN9 531 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 PHF20Q9BVI0 1012 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 NCOA5Q9HCD5 579 aaKnown RBP7.24□□□□□ -1.25
PTCD3-211ENST00000476215 NDOR1Q9UHB4 597 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 CNOT6Q9ULM6 557 aaKnown RBP7.24□□□□□ -1.25
PTCD3-211ENST00000476215 TRAF6Q9Y4K3 522 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 PCDHA2Q9Y5H9 948 aa7.24□□□□□ -1.25
PTCD3-211ENST00000476215 NUDT19A8MXV4 375 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 RFXAPO00287 272 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 MYO1BO43795 1136 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 RAPGEF3O95398 923 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 HSD3B2P26439 372 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 TKFCQ3LXA3 575 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 MAMDC2Q7Z304 686 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-211ENST00000476215 TMC6Q7Z403 805 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 TMEFF1Q8IYR6 380 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 SYNPOQ8N3V7 929 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 DACT3Q96B18 629 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-211ENST00000476215 MTA3Q9BTC8 594 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 MRPL4Q9BYD3 311 aaKnown RBP7.23□□□□□ -1.25
PTCD3-211ENST00000476215 GPR27Q9NS67 375 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 BTG4Q9NY30 223 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 GULP1Q9UBP9 304 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 SFMBT1Q9UHJ3 866 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 NPFFR2Q9Y5X5 522 aa7.23□□□□□ -1.25
PTCD3-211ENST00000476215 ASXL2Q76L83 1435 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 PLD2O14939 933 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 CLSTN1O94985 981 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 RSPO2Q6UXX9 243 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-211ENST00000476215 TMEM151BQ8IW70 566 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 CHAMP1Q96JM3 812 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 CD2APQ9Y5K6 639 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 TIMM13Q9Y5L4 95 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-211ENST00000476215 IRAK3Q9Y616 596 aa7.22□□□□□ -1.25
PTCD3-211ENST00000476215 AQP7O14520 342 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 MSCO60682 206 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
PTCD3-211ENST00000476215 C21orf62-AS1Q17RA5 79 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 PLEKHG4Q58EX7 1191 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 ZC3H14Q6PJT7 736 aaKnown RBP7.21□□□□□ -1.26
PTCD3-211ENST00000476215 TTLL10Q6ZVT0 673 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 IFNL3Q8IZI9 196 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 NETO2Q8NC67 525 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 FEZ1Q99689 392 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 ZFYVE21Q9BQ24 234 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 SLC52A2Q9HAB3 445 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 RWDD3Q9Y3V2 267 aa7.21□□□□□ -1.26
PTCD3-211ENST00000476215 CADPSQ9ULU8 1353 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 A0A1W2PQJ5 194 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 PPP1R11O60927 126 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-211ENST00000476215 EFCAB14O75071 495 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 PI3P19957 117 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 TACR1P25103 407 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 BCL6P41182 706 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 GPR85P60893 370 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 LSAMPQ13449 338 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 MTDHQ86UE4 582 aaKnown RBP7.2□□□□□ -1.26
PTCD3-211ENST00000476215 FAM129CQ86XR2 697 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 SLC7A14Q8TBB6 771 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 USP33Q8TEY7 942 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 DPF3Q92784 378 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 TSPAN17Q96FV3 270 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 RNF38Q9H0F5 515 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 IRF2BPLQ9H1B7 796 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 MARCH2Q9P0N8 246 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 FBLN5Q9UBX5 448 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 ADAMTS20P59510 1910 aa7.2□□□□□ -1.26
PTCD3-211ENST00000476215 FUCA1P04066 466 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 GTF2A2P52657 109 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 GUCY1A3Q02108 690 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 PABPC4Q13310 644 aaKnown RBP eCLIP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms