RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	PPP1R9A	Q9ULJ8	1098 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135		Q9Y3F1	56 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	PTPRC	P08575	1304 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	MYO5A	Q9Y4I1	1855 aa	Known RBP	8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	CACNA1G	O43497	2377 aa		8.71	□□□□□ -1.01
HDAC9-223	ENST00000476135	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	MED19	A0JLT2	244 aa	Predicted RBP	8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135		H0Y858	1186 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	MBTPS2	O43462	519 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	GJB5	O95377	273 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	MS4A1	P11836	297 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	PLCD1	P51178	756 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	VCP	P55072	806 aa	Known RBP	8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	NBPF20	Q3BBV1	942 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	LCE2A	Q5TA79	106 aa	Predicted RBP	8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	TREML4	Q6UXN2	200 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	TMEM179	Q6ZVK1	233 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	NOL8	Q76FK4	1167 aa	Known RBP	8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	SIAH1	Q8IUQ4	282 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	BANK1	Q8NDB2	785 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	TEX13B	Q9BXU2	312 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	TLR9	Q9NR96	1032 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	FBXO28	Q9NVF7	368 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	MYO15A	Q9UKN7	3530 aa		8.71	□□□□□ -1.02
HDAC9-223	ENST00000476135	STXBP3	O00186	592 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	DYNC1LI2	O43237	492 aa	Predicted RBP	8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	CCNYL3	P0C7X3	344 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	UBTFL1	P0CB47	393 aa	Predicted RBP	8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	LTBR	P36941	435 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	DEFB103A	P81534	67 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	SIGLEC14	Q08ET2	396 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	BFSP2	Q13515	415 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	LRRFIP1	Q32MZ4	808 aa	Known RBP	8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	TCEAL5	Q5H9L2	206 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	EP400NL	Q6ZTU2	488 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	CCDC144CP	Q8IYA2	1237 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	SAMD11	Q96NU1	681 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	CRBN	Q96SW2	442 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	NSUN3	Q9H649	340 aa	Known RBP	8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	ATP13A2	Q9NQ11	1180 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	POLR3E	Q9NVU0	708 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	CLDND1	Q9NY35	253 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	HDAC5	Q9UQL6	1122 aa		8.7	□□□□□ -1.02
HDAC9-223	ENST00000476135	BAHCC1	Q9P281	2608 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	NAV1	Q8NEY1	1877 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	ATP2A1	O14983	1001 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	CYP2E1	P05181	493 aa	Predicted RBP	8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	CYP7A1	P22680	504 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	ICA1	Q05084	483 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	SMAD4	Q13485	552 aa	Known RBP	8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	IQSEC1	Q6DN90	963 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	SNRNP48	Q6IEG0	339 aa	Known RBP	8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	TMCO2	Q7Z6W1	182 aa	Predicted RBP	8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	RPAIN	Q86UA6	219 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	ANKRD35	Q8N283	1001 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	CNTNAP3B	Q96NU0	1288 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	C17orf80	Q9BSJ5	609 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	CNTNAP3	Q9BZ76	1288 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	SNRK	Q9NRH2	765 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	RIPK3	Q9Y572	518 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	MYH8	P13535	1937 aa		8.69	□□□□□ -1.02
HDAC9-223	ENST00000476135	TRIP12	Q14669	1992 aa	Predicted RBP	8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	GVINP1	Q7Z2Y8	2422 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	ABHD14A-ACY1	A0A1B0GW23	586 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135		H3BNC9	293 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	SIAH2	O43255	324 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	EFCAB14	O75071	495 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	PARN	O95453	639 aa	Known RBP	8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	POLR3D	P05423	398 aa	Predicted RBP	8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	PTPRN	Q16849	979 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	CNKSR3	Q6P9H4	555 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	DGLUCY	Q7Z3D6	616 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	ADSSL1	Q8N142	457 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	EHBP1	Q8NDI1	1231 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	PRR7	Q8TB68	274 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	NKD2	Q969F2	451 aa	Predicted RBP	8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	ASIC4	Q96FT7	647 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	FBXO40	Q9UH90	709 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	INSL6	Q9Y581	213 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	SCN10A	Q9Y5Y9	1956 aa		8.68	□□□□□ -1.02
HDAC9-223	ENST00000476135	ASB14	A6NK59	587 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	LOC730098	B7Z3J9	87 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	CXCL10	P02778	98 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	SH3BP2	P78314	561 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	PURA	Q00577	322 aa	Known RBP	8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	PTPN11	Q06124	597 aa	Predicted RBP	8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	GPM6B	Q13491	265 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	CBX2	Q14781	532 aa	Predicted RBP	8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	GPNMB	Q14956	572 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	EPC2	Q52LR7	807 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	MCTP2	Q6DN12	878 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	NFRKB	Q6P4R8	1299 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	TMED8	Q6PL24	325 aa	Predicted RBP	8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	PARP9	Q8IXQ6	854 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	CCDC155	Q8N6L0	562 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	MIGA1	Q8NAN2	632 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	CHST13	Q8NET6	341 aa		8.67	□□□□□ -1.02
HDAC9-223	ENST00000476135	AFAP1L1	Q8TED9	768 aa		8.67	□□□□□ -1.02

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