RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 USP17L24Q0WX57 530 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 RESTQ13127 1097 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 MTMR2Q13614 643 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 RRP1BQ14684 758 aaKnown RBP8.01□□□□□ -1.13
SHQ1-207ENST00000475558 COG2Q14746 738 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 PLEKHH3Q7Z736 793 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 FBXO11Q86XK2 927 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 MCF2L2Q86YR7 1114 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 DIS3L2Q8IYB7 885 aaKnown RBP8.01□□□□□ -1.13
SHQ1-207ENST00000475558 BLIDQ8IZY5 108 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 USP6NLQ92738 828 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 CUL5Q93034 780 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 CCDC34Q96HJ3 373 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 GUCD1Q96NT3 240 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 KCNK17Q96T54 332 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 PYM1Q9BRP8 204 aaKnown RBP8.01□□□□□ -1.13
SHQ1-207ENST00000475558 PSTPIP2Q9H939 334 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 JMJD4Q9H9V9 463 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 TXNRD2Q9NNW7 524 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 GPCPD1Q9NPB8 672 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 CNTNAP5Q8WYK1 1306 aa8.01□□□□□ -1.13
SHQ1-207ENST00000475558 UNC80Q8N2C7 3258 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 CCDC194A0A1B0GVG4 234 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 A0A1W2PRG0 241 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 BTBD18B2RXH4 712 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 CYTH3O43739 400 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 MSCO60682 206 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
SHQ1-207ENST00000475558 GOLGA8HP0CJ92 632 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 USP11P51784 963 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 NAPAP54920 295 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 DNM1Q05193 864 aaKnown RBP8□□□□□ -1.13
SHQ1-207ENST00000475558 MAP2K5Q13163 448 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 PKP1Q13835 747 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 SLC39A14Q15043 492 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 CCL14Q16627 93 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 Q3C1V9 767 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 TKFCQ3LXA3 575 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 MORN1Q5T089 497 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 ZNF697Q5TEC3 545 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 MYSM1Q5VVJ2 828 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 MFSD14CQ5VZR4 134 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 ADALQ6DHV7 355 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 KCTD1Q719H9 257 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 HEATR3Q7Z4Q2 680 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 GPR142Q7Z601 462 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 RAB11FIP4Q86YS3 637 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 CMTR1Q8N1G2 835 aaKnown RBP8□□□□□ -1.13
SHQ1-207ENST00000475558 MB21D1Q8N884 522 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 SPATA32Q96LK8 384 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 PIGSQ96S52 555 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 APBA2Q99767 749 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 SLF1Q9BQI6 1058 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 SENP6Q9GZR1 1112 aaPredicted RBP8□□□□□ -1.13
SHQ1-207ENST00000475558 UBA5Q9GZZ9 404 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 PORCNQ9H237 461 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 EHMT1Q9H9B1 1298 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 RIC8AQ9NPQ8 531 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 ISY1Q9ULR0 285 aaKnown RBP8□□□□□ -1.13
SHQ1-207ENST00000475558 PCDHA1Q9Y5I3 950 aa8□□□□□ -1.13
SHQ1-207ENST00000475558 STXBP3O00186 592 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 TRAK2O60296 914 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 COPB2P35606 906 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
SHQ1-207ENST00000475558 ADCY7P51828 1080 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 CCNA1P78396 465 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 AP3B2Q13367 1082 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 DSG2Q14126 1118 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 STK38Q15208 465 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 KLHL40Q2TBA0 621 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 ANO1Q5XXA6 986 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 ARL6IP4Q66PJ3 421 aaKnown RBP7.99□□□□□ -1.13
SHQ1-207ENST00000475558 FERMT3Q86UX7 667 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 ACER1Q8TDN7 264 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 FERMT2Q96AC1 680 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 FAM161BQ96MY7 647 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 PAGR1Q9BTK6 254 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 RANBP17Q9H2T7 1088 aaKnown RBP7.99□□□□□ -1.13
SHQ1-207ENST00000475558 VPS54Q9P1Q0 977 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 DDX20Q9UHI6 824 aaKnown RBP7.99□□□□□ -1.13
SHQ1-207ENST00000475558 PRR12Q9ULL5 1215 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 MTMR7Q9Y216 660 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 DDX49Q9Y6V7 483 aaKnown RBP7.99□□□□□ -1.13
SHQ1-207ENST00000475558 ABCB11O95342 1321 aa7.99□□□□□ -1.13
SHQ1-207ENST00000475558 FRMPD2Q68DX3 1309 aaPredicted RBP7.99□□□□□ -1.13
SHQ1-207ENST00000475558 A0A1W2PQ27 194 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 A0A1W2PQ64 194 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 A0A1W2PQD8 194 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 SLC15A5A6NIM6 579 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 B4DLN1 442 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 DNM1LO00429 736 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 ATP2A1O14983 1001 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 SPTLC2O15270 562 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 CTAGE5O15320 804 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 PEX10O60683 326 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 ICAM1P05362 532 aa7.98□□□□□ -1.13
SHQ1-207ENST00000475558 GCFC2P16383 781 aaKnown RBP7.98□□□□□ -1.13
SHQ1-207ENST00000475558 PTPN5P54829 565 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms