RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 CAMKK2Q96RR4 588 aa7.3□□□□□ -1.24
SDHB-205ENST00000475506 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
SDHB-205ENST00000475506 OXSMQ9NWU1 459 aa7.3□□□□□ -1.24
SDHB-205ENST00000475506 ZSWIM5Q9P217 1185 aa7.3□□□□□ -1.24
SDHB-205ENST00000475506 SPEF1Q9Y4P9 236 aa7.3□□□□□ -1.24
SDHB-205ENST00000475506 E2F8A0AVK6 867 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 C7orf72A4D263 438 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 H3BS24 57 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 WIPF1O43516 503 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 MT-CO1P00395 513 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 APPP05067 770 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 ZSCAN20P17040 1043 aaPredicted RBP7.29□□□□□ -1.24
SDHB-205ENST00000475506 BCL6P41182 706 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 RHBDL3P58872 404 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 NXNQ6DKJ4 435 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 FSTL4Q6MZW2 842 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 OTOP1Q7RTM1 612 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 HDGFL2Q7Z4V5 671 aaPredicted RBP7.29□□□□□ -1.24
SDHB-205ENST00000475506 NLRP10Q86W26 655 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 JPH3Q8WXH2 748 aaPredicted RBP7.29□□□□□ -1.24
SDHB-205ENST00000475506 SCARF2Q96GP6 870 aaPredicted RBP7.29□□□□□ -1.24
SDHB-205ENST00000475506 FUBP3Q96I24 572 aaKnown RBP eCLIP7.29□□□□□ -1.24
SDHB-205ENST00000475506 KCNJ15Q99712 375 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 CDADC1Q9BWV3 514 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 SEMA3GQ9NS98 782 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 RAXQ9Y2V3 346 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
SDHB-205ENST00000475506 PLEKHD1A6NEE1 506 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 FAM47E-STBD1D6RA91 191 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 MYBL2P10244 700 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 KPNA1P52294 538 aaPredicted RBP7.28□□□□□ -1.24
SDHB-205ENST00000475506 LACTBP83111 547 aaPredicted RBP7.28□□□□□ -1.24
SDHB-205ENST00000475506 LSAMPQ13449 338 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 LAPTM5Q13571 262 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 MLC1Q15049 377 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 PCBP2Q15366 365 aaKnown RBP eCLIP7.28□□□□□ -1.241e-6■■□□□ 13.5
SDHB-205ENST00000475506 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 CCSAPQ6IQ19 270 aaPredicted RBP7.28□□□□□ -1.24
SDHB-205ENST00000475506 CCAR1Q8IX12 1150 aaKnown RBP7.28□□□□□ -1.24
SDHB-205ENST00000475506 CMIPQ8IY22 773 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 C2orf69Q8N8R5 385 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 SLC5A5Q92911 643 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 UBE2FQ969M7 185 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 JAM3Q9BX67 310 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 SMURF1Q9HCE7 757 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
SDHB-205ENST00000475506 TIMM13Q9Y5L4 95 aaPredicted RBP7.28□□□□□ -1.24
SDHB-205ENST00000475506 ZNF561-AS1K7EIQ3 104 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 PPP1R11O60927 126 aaPredicted RBP7.27□□□□□ -1.25
SDHB-205ENST00000475506 RFPL1O75677 317 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 AMY2AP04746 511 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 ZBTB48P10074 688 aaPredicted RBP7.27□□□□□ -1.25
SDHB-205ENST00000475506 PDE6AP16499 860 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 AMY2BP19961 511 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 JAM2P57087 298 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 ST5P78524 1137 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 TEKQ02763 1124 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 KLF1Q13351 362 aaPredicted RBP7.27□□□□□ -1.25
SDHB-205ENST00000475506 RNF111Q6ZNA4 994 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 OSTM1Q86WC4 334 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 MAGEB6Q8N7X4 407 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 SLC39A13Q96H72 371 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 AHCYL2Q96HN2 611 aaKnown RBP7.27□□□□□ -1.25
SDHB-205ENST00000475506 MS4A5Q9H3V2 200 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 ARNT2Q9HBZ2 717 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 CHST12Q9NRB3 414 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 CATSPERZQ9NTU4 200 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 C14orf119Q9NWQ9 140 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 ERVK13-1Q9NX77 482 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 STOML1Q9UBI4 398 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 DUSP13Q9UII6 198 aa7.27□□□□□ -1.25
SDHB-205ENST00000475506 LUC7L2Q9Y383 392 aaKnown RBP7.27□□□□□ -1.25
SDHB-205ENST00000475506 TRBV23OR9-2A0A075B6M9 112 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.26□□□□□ -1.25
SDHB-205ENST00000475506 TCRBV5S4A2TA0A5A2 114 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 DVL2O14641 736 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 KCNK3O14649 394 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 ULK1O75385 1050 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 OCRLQ01968 901 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 TCIRG1Q13488 830 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 UBE4AQ14139 1066 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 ODF1Q14990 250 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 BROXQ5VW32 411 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 CD163Q86VB7 1156 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 C11orf74Q86VG3 221 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 TPH2Q8IWU9 490 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 PSMD1Q99460 953 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 SLC13A1Q9BZW2 595 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 CLDND1Q9NY35 253 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 ZNF281Q9Y2X9 895 aa7.26□□□□□ -1.25
SDHB-205ENST00000475506 SSU72P8A0A1W2PR75 194 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 WTIPA6NIX2 430 aaPredicted RBP7.25□□□□□ -1.25
SDHB-205ENST00000475506 CAND2O75155 1236 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 ESR1P03372 595 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 CEACAM5P06731 702 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 SESN3P58005 492 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 RPL11P62913 178 aaKnown RBP7.25□□□□□ -1.25
SDHB-205ENST00000475506 CYP27A1Q02318 531 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 DDB1Q16531 1140 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 RNF43Q68DV7 783 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms