RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 C17orf80Q9BSJ5 609 aa21.14■□□□□ 0.97
RNF220-212ENST00000475378 ANAPC4Q9UJX5 808 aa21.14■□□□□ 0.97
RNF220-212ENST00000475378 WDR19Q8NEZ3 1342 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 ORC4O43929 436 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 RANBP6O60518 1105 aaKnown RBP21.13■□□□□ 0.97
RNF220-212ENST00000475378 FGRP09769 529 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 MBTPS1Q14703 1052 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 TRIM71Q2Q1W2 868 aaKnown RBP21.13■□□□□ 0.97
RNF220-212ENST00000475378 PUS10Q3MIT2 529 aaKnown RBP21.13■□□□□ 0.97
RNF220-212ENST00000475378 FAM117BQ6P1L5 589 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 FBXO22Q8NEZ5 403 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 FBXL18Q96ME1 805 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 UIMC1Q96RL1 719 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 KCNH6Q9H252 994 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 GPCPD1Q9NPB8 672 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 PNMA2Q9UL42 364 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 MYH6P13533 1939 aa21.13■□□□□ 0.97
RNF220-212ENST00000475378 RALGAPA2Q2PPJ7 1873 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 DCXO43602 365 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 IKBKEQ14164 716 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 LY6KQ17RY6 165 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 WNT8BQ93098 351 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 MRPL38Q96DV4 380 aaKnown RBP21.12■□□□□ 0.97
RNF220-212ENST00000475378 TMEM47Q9BQJ4 181 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 HDAC6Q9UBN7 1215 aa21.12■□□□□ 0.97
RNF220-212ENST00000475378 B4DLN1 442 aa21.11■□□□□ 0.97
RNF220-212ENST00000475378 GH1P01241 217 aa21.11■□□□□ 0.97
RNF220-212ENST00000475378 PDHBP11177 359 aa21.11■□□□□ 0.97
RNF220-212ENST00000475378 TOP1P11387 765 aaKnown RBP21.11■□□□□ 0.97
RNF220-212ENST00000475378 MRPL12P52815 198 aaKnown RBP21.11■□□□□ 0.97
RNF220-212ENST00000475378 HTRA4P83105 476 aaPredicted RBP21.11■□□□□ 0.97
RNF220-212ENST00000475378 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
RNF220-212ENST00000475378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.11■□□□□ 0.97
RNF220-212ENST00000475378 SP7Q8TDD2 431 aaPredicted RBP21.11■□□□□ 0.97
RNF220-212ENST00000475378 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
RNF220-212ENST00000475378 INSL6Q9Y581 213 aa21.11■□□□□ 0.97
RNF220-212ENST00000475378 H3BQ06 376 aaPredicted RBP21.1■□□□□ 0.97
RNF220-212ENST00000475378 CASTP20810 708 aaKnown RBP21.1■□□□□ 0.97
RNF220-212ENST00000475378 PTK7Q13308 1070 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 COL19A1Q14993 1142 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 ZNF618Q5T7W0 954 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 RGS22Q8NE09 1264 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 PI4K2BQ8TCG2 481 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 CRBNQ96SW2 442 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 TCP11L1Q9NUJ3 509 aa21.1■□□□□ 0.97
RNF220-212ENST00000475378 COL4A6Q14031 1691 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 C19orf67A6NJJ6 358 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 HAS3O00219 553 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 SNHG28P0DPA3 235 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 ZP2Q05996 745 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 ZNF543Q08ER8 600 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 CTNNA3Q9UI47 895 aa21.09■□□□□ 0.97
RNF220-212ENST00000475378 TTC41PQ6P2S7 1318 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 TECTAO75443 2155 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 LGR5O75473 907 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 PSEN2P49810 448 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 DGKDQ16760 1214 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 EPC2Q52LR7 807 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 TIGD5Q53EQ6 642 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 VPS53Q5VIR6 699 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 C7orf31Q8N865 590 aa21.08■□□□□ 0.97
RNF220-212ENST00000475378 EMID1Q96A84 441 aaPredicted RBP21.08■□□□□ 0.97
RNF220-212ENST00000475378 PABPC5Q96DU9 382 aaKnown RBP21.08■□□□□ 0.97
RNF220-212ENST00000475378 USP34Q70CQ2 3546 aa21.08■□□□□ 0.96
RNF220-212ENST00000475378 F2P00734 622 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 MFSD10Q14728 455 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 PTPROQ16827 1216 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 CHST3Q7LGC8 479 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 TBC1D5Q92609 795 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 SAMD11Q96NU1 681 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 TAAR1Q96RJ0 339 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 ALG1Q9BT22 464 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 KATNAL1Q9BW62 490 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 COL20A1Q9P218 1284 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 PRKAG3Q9UGI9 489 aa21.07■□□□□ 0.96
RNF220-212ENST00000475378 DDX41Q9UJV9 622 aaKnown RBP21.07■□□□□ 0.96
RNF220-212ENST00000475378 H3BNC9 293 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 ZNF200P98182 395 aaPredicted RBP21.06■□□□□ 0.96
RNF220-212ENST00000475378 HIC1Q14526 733 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 USH1GQ495M9 461 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 TCEAL5Q5H9L2 206 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 HFE2Q6ZVN8 426 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 MYOCDQ8IZQ8 938 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 BANK1Q8NDB2 785 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 DBF4BQ8NFT6 615 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 MAF1Q9H063 256 aa21.06■□□□□ 0.96
RNF220-212ENST00000475378 AMHP03971 560 aa21.05■□□□□ 0.96
RNF220-212ENST00000475378 HOXD8P13378 290 aaPredicted RBP21.05■□□□□ 0.96
RNF220-212ENST00000475378 ALX1Q15699 326 aa21.05■□□□□ 0.96
RNF220-212ENST00000475378 KIAA0753Q2KHM9 967 aa21.05■□□□□ 0.96
RNF220-212ENST00000475378 C20orf194Q5TEA3 1177 aa21.05■□□□□ 0.96
RNF220-212ENST00000475378 SYTL5Q8TDW5 730 aaPredicted RBP21.05■□□□□ 0.96
RNF220-212ENST00000475378 ANKS1AQ92625 1134 aa21.05■□□□□ 0.96
RNF220-212ENST00000475378 EMSYQ7Z589 1322 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 ZNF286BP0CG31 522 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 STXBP2Q15833 593 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 PLEKHG4Q58EX7 1191 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 ADHFE1Q8IWW8 467 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms