RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 PRR33A8MZF0 331 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 EFCAB14O75071 495 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 GH1P01241 217 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 ZNF543Q08ER8 600 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 TCTN1Q2MV58 587 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
ITGB1-211ENST00000475184 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
ITGB1-211ENST00000475184 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 TCP11L1Q9NUJ3 509 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 GTF2IRD1Q9UHL9 959 aa18.68■□□□□ 0.58
ITGB1-211ENST00000475184 CASTP20810 708 aaKnown RBP18.67■□□□□ 0.58
ITGB1-211ENST00000475184 IKBKEQ14164 716 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 LY6KQ17RY6 165 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 USH1GQ495M9 461 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 FAM117BQ6P1L5 589 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 SEPT14Q6ZU15 432 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 CHST3Q7LGC8 479 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 RGS22Q8NE09 1264 aa18.67■□□□□ 0.58
ITGB1-211ENST00000475184 SSTR3P32745 418 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-211ENST00000475184 ALX1Q15699 326 aa18.66■□□□□ 0.58
ITGB1-211ENST00000475184 DGKDQ16760 1214 aa18.66■□□□□ 0.58
ITGB1-211ENST00000475184 ALYREFQ86V81 257 aaKnown RBP18.66■□□□□ 0.58
ITGB1-211ENST00000475184 C7orf31Q8N865 590 aa18.66■□□□□ 0.58
ITGB1-211ENST00000475184 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-211ENST00000475184 HDAC6Q9UBN7 1215 aa18.66■□□□□ 0.58
ITGB1-211ENST00000475184 ATG2AQ2TAZ0 1938 aa18.66■□□□□ 0.58
ITGB1-211ENST00000475184 RALGAPA2Q2PPJ7 1873 aa18.65■□□□□ 0.58
ITGB1-211ENST00000475184 SNHG28P0DPA3 235 aa18.65■□□□□ 0.58
ITGB1-211ENST00000475184 IL9P15248 144 aa18.65■□□□□ 0.58
ITGB1-211ENST00000475184 MX1P20591 662 aa18.65■□□□□ 0.58
ITGB1-211ENST00000475184 PTCRAQ6ISU1 281 aaPredicted RBP18.65■□□□□ 0.58
ITGB1-211ENST00000475184 FBXO22Q8NEZ5 403 aa18.65■□□□□ 0.58
ITGB1-211ENST00000475184 ALADP13716 330 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 PSEN2P49810 448 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 PTK7Q13308 1070 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 MBTPS1Q14703 1052 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 TRAF7Q6Q0C0 670 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 MIER1Q8N108 512 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
ITGB1-211ENST00000475184 TTC14Q96N46 770 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 UIMC1Q96RL1 719 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 C17orf80Q9BSJ5 609 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 ALG1Q9BT22 464 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 KATNAL1Q9BW62 490 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 INSL6Q9Y581 213 aa18.64■□□□□ 0.57
ITGB1-211ENST00000475184 GRXCR2A6NFK2 248 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 RBAK-RBAKDNI3L0D1 243 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 F2P00734 622 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 FGAP02671 866 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 MFSD10Q14728 455 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 STXBP2Q15833 593 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 TRIM71Q2Q1W2 868 aaKnown RBP18.63■□□□□ 0.57
ITGB1-211ENST00000475184 GPATCH4Q5T3I0 446 aaKnown RBP18.63■□□□□ 0.57
ITGB1-211ENST00000475184 ZNF618Q5T7W0 954 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 SYTL5Q8TDW5 730 aaPredicted RBP18.63■□□□□ 0.57
ITGB1-211ENST00000475184 WNT8BQ93098 351 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 EMID1Q96A84 441 aaPredicted RBP18.63■□□□□ 0.57
ITGB1-211ENST00000475184 MRPL38Q96DV4 380 aaKnown RBP18.63■□□□□ 0.57
ITGB1-211ENST00000475184 TAAR1Q96RJ0 339 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 MAF1Q9H063 256 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 COL20A1Q9P218 1284 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 LAMA4Q16363 1823 aa18.63■□□□□ 0.57
ITGB1-211ENST00000475184 LGR5O75473 907 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 GOLGA8HP0CJ92 632 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 CSPP1Q1MSJ5 1256 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 KIAA0753Q2KHM9 967 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 PUS10Q3MIT2 529 aaKnown RBP18.62■□□□□ 0.57
ITGB1-211ENST00000475184 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.62■□□□□ 0.57
ITGB1-211ENST00000475184 TBC1D5Q92609 795 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 IWS1Q96ST2 819 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 RMDN3Q96TC7 470 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 CPVLQ9H3G5 476 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 HELLSQ9NRZ9 838 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
ITGB1-211ENST00000475184 EMSYQ7Z589 1322 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 KAT6AQ92794 2004 aa18.62■□□□□ 0.57
ITGB1-211ENST00000475184 ABCB11O95342 1321 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 ZMYM6O95789 1325 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 HAS3O00219 553 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 AMHP03971 560 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 HTRA4P83105 476 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-211ENST00000475184 CDC37Q16543 378 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-211ENST00000475184 TIGD5Q53EQ6 642 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 PPTC7Q8NI37 304 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 NEK9Q8TD19 979 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
ITGB1-211ENST00000475184 H3BQ06 376 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-211ENST00000475184 HAND2P61296 217 aa18.6■□□□□ 0.57
ITGB1-211ENST00000475184 ZNF200P98182 395 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-211ENST00000475184 MKRN4PQ13434 485 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-211ENST00000475184 LAMC2Q13753 1193 aa18.6■□□□□ 0.57
ITGB1-211ENST00000475184 PTPROQ16827 1216 aa18.6■□□□□ 0.57
ITGB1-211ENST00000475184 MCF2L2Q86YR7 1114 aa18.6■□□□□ 0.57
ITGB1-211ENST00000475184 SP7Q8TDD2 431 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-211ENST00000475184 EVI5LQ96CN4 794 aa18.6■□□□□ 0.57
ITGB1-211ENST00000475184 MRVI1Q9Y6F6 885 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms