RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CDC45O75419 566 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 CABYRO75952 493 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
PDPN-204ENST00000475043 EIF2AK2P19525 551 aaKnown RBP10.93□□□□□ -0.66
PDPN-204ENST00000475043 ITGB8P26012 769 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 KIF5BP33176 963 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 CPT1AP50416 773 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 CDK7P50613 346 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 NKX3-2P78367 333 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 TRAF1Q13077 416 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 ITGA7Q13683 1181 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 STXBP2Q15833 593 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 RNF20Q5VTR2 975 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 SEPT14Q6ZU15 432 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 ZNF654Q8IZM8 581 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 MTMR8Q96EF0 704 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 TMEM87BQ96K49 555 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 MAF1Q9H063 256 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 RIOX1Q9H6W3 641 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
PDPN-204ENST00000475043 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 PNMA6FA0A0J9YX94 578 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 RBM47A0AV96 593 aaKnown RBP10.92□□□□□ -0.66
PDPN-204ENST00000475043 OPLAHO14841 1288 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 NKRFO15226 690 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDPN-204ENST00000475043 CYTH3O43739 400 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 DDAH1O94760 285 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 MYL3P08590 195 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 NUDT7P0C024 238 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
PDPN-204ENST00000475043 PSMC6P62333 389 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 FPGSQ05932 587 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 SHHQ15465 462 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 BRDTQ58F21 947 aaPredicted RBP10.92□□□□□ -0.66
PDPN-204ENST00000475043 FAM126BQ8IXS8 530 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 COPS5Q92905 334 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 IWS1Q96ST2 819 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 MTA3Q9BTC8 594 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 LRRC2Q9BYS8 371 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
PDPN-204ENST00000475043 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
PDPN-204ENST00000475043 BAZ2BQ9UIF8 2168 aaKnown RBP10.92□□□□□ -0.66
PDPN-204ENST00000475043 SH2B2O14492 632 aaPredicted RBP10.91□□□□□ -0.66
PDPN-204ENST00000475043 TIMP1P01033 207 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 MYCLP12524 364 aaPredicted RBP10.91□□□□□ -0.66
PDPN-204ENST00000475043 RXRAP19793 462 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 HSD17B4P51659 736 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 COL9A3Q14050 684 aaPredicted RBP10.91□□□□□ -0.66
PDPN-204ENST00000475043 SLC35G1Q2M3R5 365 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 C9orf50Q5SZB4 431 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 FCHSD1Q86WN1 690 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 RAB11FIP4Q86YS3 637 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 RRP36Q96EU6 259 aaKnown RBP10.91□□□□□ -0.66
PDPN-204ENST00000475043 MAP3K14Q99558 947 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 PXMP2Q9NR77 195 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 MAP3K20Q9NYL2 800 aaKnown RBP10.91□□□□□ -0.66
PDPN-204ENST00000475043 SEC63Q9UGP8 760 aaKnown RBP10.91□□□□□ -0.66
PDPN-204ENST00000475043 TBX21Q9UL17 535 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 SLC12A7Q9Y666 1083 aa10.91□□□□□ -0.66
PDPN-204ENST00000475043 MYH7BA7E2Y1 1941 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.66
PDPN-204ENST00000475043 EIF3JO75822 258 aaKnown RBP10.9□□□□□ -0.66
PDPN-204ENST00000475043 ARIH2O95376 493 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 NR3C2P08235 984 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 POLR2MP0CAP2 368 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 CALM1P0DP23 149 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 CALM2P0DP24 149 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 CALM3P0DP25 149 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 FOXK1P85037 733 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 PURAQ00577 322 aaKnown RBP10.9□□□□□ -0.66
PDPN-204ENST00000475043 LY6KQ17RY6 165 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 SYNE3Q6ZMZ3 975 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 Q7L0L9 218 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
PDPN-204ENST00000475043 DEFB123Q8N688 67 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 SAMD3Q8N6K7 520 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 MTG1Q9BT17 334 aaPredicted RBP10.9□□□□□ -0.66
PDPN-204ENST00000475043 SPZ1Q9BXG8 430 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 MRVI1Q9Y6F6 885 aa10.9□□□□□ -0.66
PDPN-204ENST00000475043 SZT2Q5T011 3432 aa10.9□□□□□ -0.67
PDPN-204ENST00000475043 GRIN2DO15399 1336 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 B4GALT4O60513 344 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 KPNA6O60684 536 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 PLEKHA8P1O95397 391 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 GH1P01241 217 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 CD4P01730 458 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 LIFRP42702 1097 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 GNAQP50148 359 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 EPHB4P54760 987 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 PGM5Q15124 567 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 MFSD5Q6N075 450 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms