RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 ADCYAP1R1P41586 468 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
COL1A1-204ENST00000474644 TRIM29Q14134 588 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 KRT40Q6A162 431 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 LENG1Q96BZ8 264 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-204ENST00000474644 ZFP91Q96JP5 570 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-204ENST00000474644 TMEM106CQ9BVX2 250 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 FAM184BQ9ULE4 1060 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-204ENST00000474644 C11orf97A0A1B0GVM6 126 aaPredicted RBP18■□□□□ 0.47
COL1A1-204ENST00000474644 RBM47A0AV96 593 aaKnown RBP18■□□□□ 0.47
COL1A1-204ENST00000474644 MSCO60682 206 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 EIF3JO75822 258 aaKnown RBP18■□□□□ 0.47
COL1A1-204ENST00000474644 RGS20O76081 388 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 MMP1P03956 469 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 GJB2P29033 226 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 SREBF1P36956 1147 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 ANO1Q5XXA6 986 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 LHX8Q68G74 356 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 XRRA1Q6P2D8 792 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 OXER1Q8TDS5 423 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 U2AF1L4Q8WU68 220 aaKnown RBP18■□□□□ 0.47
COL1A1-204ENST00000474644 C8orf76Q96K31 380 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
COL1A1-204ENST00000474644 STAM2O75886 525 aa17.99■□□□□ 0.47
COL1A1-204ENST00000474644 GJA8P48165 433 aa17.99■□□□□ 0.47
COL1A1-204ENST00000474644 SEPT14Q6ZU15 432 aa17.99■□□□□ 0.47
COL1A1-204ENST00000474644 SCFD2Q8WU76 684 aa17.99■□□□□ 0.47
COL1A1-204ENST00000474644 CRYGNQ8WXF5 182 aa17.99■□□□□ 0.47
COL1A1-204ENST00000474644 INPP4AQ96PE3 977 aaPredicted RBP17.99■□□□□ 0.47
COL1A1-204ENST00000474644 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
COL1A1-204ENST00000474644 POTEFA5A3E0 1075 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 ARIH2O95376 493 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 SGPL1O95470 568 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 RARBP10826 455 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 SMPD1P17405 629 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 KRT2P35908 639 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 GUCY1B3Q02153 619 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 TNFAIP2Q03169 654 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 TMEM63BQ5T3F8 832 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 DIS3L2Q8IYB7 885 aaKnown RBP17.98■□□□□ 0.47
COL1A1-204ENST00000474644 FBXO18Q8NFZ0 1043 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
COL1A1-204ENST00000474644 WDR11Q9BZH6 1224 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 CRISPLD2Q9H0B8 497 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 BRCA2P51587 3418 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 FRMPD3Q5JV73 1810 aa17.98■□□□□ 0.47
COL1A1-204ENST00000474644 PTGS1P23219 599 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 NR5A1Q13285 461 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 TTLL4Q14679 1199 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 GNPTABQ3T906 1256 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 KRT25Q7Z3Z0 450 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 TNFRSF25Q93038 417 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 XPNPEP3Q9NQH7 507 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 RTEL1Q9NZ71 1219 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 OGDHLQ9ULD0 1010 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 GNEQ9Y223 722 aaKnown RBP17.97■□□□□ 0.47
COL1A1-204ENST00000474644 SYNRGQ9UMZ2 1314 aa17.97■□□□□ 0.47
COL1A1-204ENST00000474644 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
COL1A1-204ENST00000474644 CYP3A4P08684 503 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 TXNP10599 105 aaKnown RBP17.96■□□□□ 0.47
COL1A1-204ENST00000474644 ITGB5P18084 799 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 NONOQ15233 471 aaKnown RBP eCLIP17.96■□□□□ 0.47
COL1A1-204ENST00000474644 DUSP28Q4G0W2 176 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 GJC2Q5T442 439 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-204ENST00000474644 CCDC62Q6P9F0 684 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 TBCKQ8TEA7 893 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
COL1A1-204ENST00000474644 CCDC194A0A1B0GVG4 234 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 BTBD18B2RXH4 712 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 FIBPO43427 364 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 ADAMTS4O75173 837 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 ICAM3P32942 547 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 SEMA3FQ13275 785 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 SAFBQ15424 915 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL1A1-204ENST00000474644 EARS2Q5JPH6 523 aaKnown RBP17.95■□□□□ 0.46
COL1A1-204ENST00000474644 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 TLK2Q86UE8 772 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 NLRX1Q86UT6 975 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 UPF3AQ9H1J1 476 aaKnown RBP17.95■□□□□ 0.46
COL1A1-204ENST00000474644 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
COL1A1-204ENST00000474644 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 SPATA31C2B4DYI2 1134 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 NKRFO15226 690 aaKnown RBP eCLIP17.94■□□□□ 0.46
COL1A1-204ENST00000474644 PGK1P00558 417 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 TFRCP02786 760 aaKnown RBP17.94■□□□□ 0.46
COL1A1-204ENST00000474644 EN2P19622 333 aaPredicted RBP17.94■□□□□ 0.46
COL1A1-204ENST00000474644 UBA1P22314 1058 aaKnown RBP17.94■□□□□ 0.46
COL1A1-204ENST00000474644 LY6KQ17RY6 165 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 INF2Q27J81 1249 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 CEP55Q53EZ4 464 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 KCNV1Q6PIU1 500 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 COPS5Q92905 334 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 MXRA8Q9BRK3 442 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 JADE2Q9NQC1 790 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms